RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 OR10J4P0C629 311 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 PSG7Q13046 419 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 GABRA6Q16445 453 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 NABP1Q96AH0 204 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 R3HDM4Q96D70 268 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 HSPB9Q9BQS6 159 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 NAGKQ9UJ70 344 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 FOXD3Q9UJU5 478 aaPredicted RBP9.62□□□□□ -0.87
SMPD4-218ENST00000482171 APELAP0DMC3 54 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 F2RP25116 425 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 UBE2G1P62253 170 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 ACSM6Q6P461 480 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 C11orf42Q8N5U0 333 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 DTD1Q8TEA8 209 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 TMEM230Q96A57 120 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 TMEM147Q9BVK8 224 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 BET1LQ9NYM9 111 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 IL36GQ9NZH8 169 aa9.62□□□□□ -0.87
SMPD4-218ENST00000482171 LAMA3Q16787 3333 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 SIAH2O43255 324 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST1H2BKO60814 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 TFF1P04155 84 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST1H2BJP06899 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST1H2BOP23527 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST1H2BBP33778 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 IER3P46695 156 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST1H2BDP58876 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST1H2BCP62807 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 RPL31P62899 125 aaKnown RBP9.61□□□□□ -0.87
SMPD4-218ENST00000482171 FOXF2Q12947 444 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST2H2BEQ16778 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 PYY3Q5JQD4 70 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST1H2BHQ93079 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST1H2BNQ99877 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HIST1H2BMQ99879 126 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 LRFN3Q9BTN0 628 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 TMEM222Q9H0R3 208 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 CYTL1Q9NRR1 136 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 FAM157AC9JC47 383 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 HRASP01112 189 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 CD5P06127 495 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 SRP19P09132 144 aaKnown RBP9.61□□□□□ -0.87
SMPD4-218ENST00000482171 MPV17P39210 176 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 GFRA1P56159 465 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 RNASEKQ6P5S7 137 aaKnown RBP9.61□□□□□ -0.87
SMPD4-218ENST00000482171 ZNRF1Q8ND25 227 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 OR5P3Q8WZ94 311 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 RAB24Q969Q5 203 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 POM121L2Q96KW2 1035 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 C1QTNF5Q9BXJ0 243 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 SMPD2O60906 423 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 CA11O75493 328 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 OR4A8P0C604 315 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 TMEM187Q14656 261 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 WBP1Q96G27 269 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 MS4A5Q9H3V2 200 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 RPRMQ9NS64 109 aa9.61□□□□□ -0.87
SMPD4-218ENST00000482171 SNURFLB1AK76 121 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 SUB1P53999 127 aaKnown RBP eCLIP9.6□□□□□ -0.879e-7■■■□□ 17.7
SMPD4-218ENST00000482171 ACSF3Q4G176 576 aaPredicted RBP9.6□□□□□ -0.87
SMPD4-218ENST00000482171 LURAP1LQ8IV03 231 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 RPEQ96AT9 228 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 GINS3Q9BRX5 216 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 GAL3ST2Q9H3Q3 398 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 RBKSQ9H477 322 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 MOB3AQ96BX8 217 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 MANBALQ9NQG1 85 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 FBLN5Q9UBX5 448 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 IGSF23A1L1A6 192 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 AGAP20933 346 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 SSTR5P35346 364 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 GPX4P36969 197 aaPredicted RBP9.6□□□□□ -0.87
SMPD4-218ENST00000482171 SLC35B1P78383 322 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 COL5A1-AS1Q5SY13 56 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 FAM166AQ6J272 317 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 TP53RKQ96S44 253 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 LPAR2Q9HBW0 351 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 CLN8Q9UBY8 286 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 RNF24Q9Y225 148 aa9.6□□□□□ -0.87
SMPD4-218ENST00000482171 A0A0A6YYD4 124 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 CTXND1A0A1B0GTU2 59 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 NCBP2LA6PVI3 153 aaKnown RBP9.59□□□□□ -0.87
SMPD4-218ENST00000482171 ATXN7O15265 892 aaPredicted RBP9.59□□□□□ -0.87
SMPD4-218ENST00000482171 CSRP1P21291 193 aaKnown RBP9.59□□□□□ -0.87
SMPD4-218ENST00000482171 CAMPP49913 170 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 RAB7AP51149 207 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 CCL20P78556 96 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 HLA-DRB5Q30154 266 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 RNFT1Q5M7Z0 435 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 MRPL54Q6P161 138 aaKnown RBP9.59□□□□□ -0.87
SMPD4-218ENST00000482171 TMEM183AQ8IXX5 376 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 ZCCHC24Q8N2G6 241 aaKnown RBP9.59□□□□□ -0.87
SMPD4-218ENST00000482171 KDF1Q8NAX2 398 aaPredicted RBP9.59□□□□□ -0.87
SMPD4-218ENST00000482171 PKIBQ9C010 78 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 MRPS18CQ9Y3D5 142 aaKnown RBP9.59□□□□□ -0.87
SMPD4-218ENST00000482171 TLN1Q9Y490 2541 aaKnown RBP9.59□□□□□ -0.87
SMPD4-218ENST00000482171 CHD7Q9P2D1 2997 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 GRIFINA4D1Z8 144 aa9.59□□□□□ -0.87
SMPD4-218ENST00000482171 FAM157CP0CG43 387 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms