RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 PRR7Q8TB68 274 aa12□□□□□ -0.49
CHD3-211ENST00000481999 SCGB1C1Q8TD33 95 aa12□□□□□ -0.49
CHD3-211ENST00000481999 ELOVL5Q9NYP7 299 aa12□□□□□ -0.49
CHD3-211ENST00000481999 METTL1Q9UBP6 276 aaKnown RBP12□□□□□ -0.49
CHD3-211ENST00000481999 ZFYVE26Q68DK2 2539 aa12□□□□□ -0.49
CHD3-211ENST00000481999 MAP1AP78559 2803 aaPredicted RBP12□□□□□ -0.49
CHD3-211ENST00000481999 OOEPA6NGQ2 149 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 IGKV1-5P01602 117 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 SMIM6P0DI80 62 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 KHDC3LQ587J8 217 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 RAB39BQ96DA2 213 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 A0A087WWC5 75 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 A0A1W2PPE3 182 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 RNF212BA8MTL3 300 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 CEBPGP53567 150 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 UBE2KP61086 200 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 HBG1P69891 147 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 HBG2P69892 147 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 RBPJQ06330 500 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 ZNF429Q86V71 674 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 C1QL4Q86Z23 238 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 C1orf174Q8IYL3 243 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 CYB561D1Q8N8Q1 229 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 CCL13Q99616 98 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 VKORC1Q9BQB6 163 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 PSENENQ9NZ42 101 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 CRYBG3Q68DQ2 2970 aa11.99□□□□□ -0.49
CHD3-211ENST00000481999 ZFHX3Q15911 3703 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 C15orf65H3BRN8 121 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 IFNL4K9M1U5 179 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 CCL21O00585 134 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 IFNA17P01571 189 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 S100A9P06702 114 aaKnown RBP11.98□□□□□ -0.49
CHD3-211ENST00000481999 TAGLN2P37802 199 aaKnown RBP11.98□□□□□ -0.49
CHD3-211ENST00000481999 SELENOVP59797 346 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 C3orf36Q3SXR2 165 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 DMRTC2Q8IXT2 367 aaPredicted RBP11.98□□□□□ -0.49
CHD3-211ENST00000481999 OR10G4Q8NGN3 311 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 NIPSNAP3BQ9BS92 247 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 PSMG3Q9BT73 122 aaPredicted RBP11.98□□□□□ -0.49
CHD3-211ENST00000481999 PSG11Q9UQ72 335 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 IGSF10Q6WRI0 2623 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 ODAMA1E959 279 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 IAPPP10997 89 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 BRWD1-AS2P59051 145 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 ZNF816Q0VGE8 651 aaPredicted RBP11.98□□□□□ -0.49
CHD3-211ENST00000481999 FABP9Q0Z7S8 132 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 HEPN1Q6WQI6 88 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 TVP23CQ96ET8 276 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 TCEAL7Q9BRU2 100 aa11.98□□□□□ -0.49
CHD3-211ENST00000481999 IGHV2-5P01817 119 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 OR8U8P0C7N1 319 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 OR2B8PP59922 312 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 SLC35E3Q7Z769 313 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 ZNF525Q8N782 197 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 NUP37Q8NFH4 326 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 FAM234AQ9H0X4 552 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 FLNCQ14315 2725 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 LOC102723971A0A1B0GUV8 181 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 LINC00473A8K010 186 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 SHISA9B4DS77 424 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 FAM90A26D6RGX4 464 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 METTL15P1P0C7V9 234 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 ZNF134P52741 427 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 RPRMQ9NS64 109 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 ZNRD1Q9P1U0 126 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 RNF7Q9UBF6 113 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 IL19Q9UHD0 177 aa11.97□□□□□ -0.49
CHD3-211ENST00000481999 UTP20O75691 2785 aaKnown RBP11.97□□□□□ -0.49
CHD3-211ENST00000481999 E7EQL1 145 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 SIAH2O43255 324 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 PROP1O75360 226 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 DLK1P80370 383 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 TLE1Q04724 770 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 KLRB1Q12918 225 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 NINJ1Q92982 152 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 AGMATQ9BSE5 352 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 RSG1Q9BU20 258 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 CELSR1Q9NYQ6 3014 aa11.96□□□□□ -0.49
CHD3-211ENST00000481999 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.96□□□□□ -0.5
CHD3-211ENST00000481999 CXorf65A6NEN9 183 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 C17orf98A8MV24 154 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 AP4M1O00189 453 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 SLC31A2O15432 143 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 FCN3O75636 299 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 FBP1P09467 338 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 CFHR2P36980 270 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 GATA4P43694 442 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 SERF2P84101 59 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 MZT1Q08AG7 82 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 Q3ZCU0 254 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 C1orf229Q6ZS94 237 aaPredicted RBP11.96□□□□□ -0.5
CHD3-211ENST00000481999 LILRB2Q8N423 598 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 ZBTB34Q8NCN2 500 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 MBD3L1Q8WWY6 194 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 CCL17Q92583 94 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 PARD6GQ9BYG4 376 aaPredicted RBP11.96□□□□□ -0.5
CHD3-211ENST00000481999 SIRT7Q9NRC8 400 aa11.96□□□□□ -0.5
CHD3-211ENST00000481999 GNG13Q9P2W3 67 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms