RNA–Protein interactions for RNA: ENST00000481502.5

SYNE1-225, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 3

Gene SYNE1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-225ENST00000481502 C12orf45Q8N5I9 185 aaPredicted RBP6.66□□□□□ -1.34
SYNE1-225ENST00000481502 ZNF383Q8NA42 475 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 ADAD2Q8NCV1 583 aaKnown RBP6.66□□□□□ -1.34
SYNE1-225ENST00000481502 OR2T10Q8NGZ9 312 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 OR4A5Q8NH83 315 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 OR5R1Q8NH85 324 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 TCTEX1D2Q8WW35 142 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 CFHR4Q92496 578 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 RBPMSQ93062 196 aaKnown RBP6.66□□□□□ -1.34
SYNE1-225ENST00000481502 TSNAXQ99598 290 aaKnown RBP6.66□□□□□ -1.34
SYNE1-225ENST00000481502 RAB18Q9NP72 206 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 YAE1D1Q9NRH1 226 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 SLC35D1Q9NTN3 355 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 COA4Q9NYJ1 87 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 C1RLQ9NZP8 487 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 FLVCR2Q9UPI3 526 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 TMED3Q9Y3Q3 217 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 POMT1Q9Y6A1 747 aa6.66□□□□□ -1.34
SYNE1-225ENST00000481502 TLN2Q9Y4G6 2542 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 A0A0A6YYJ9 748 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 M0QZK8 103 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 LY86O95711 162 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 MOSP00540 346 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 IFNA21P01568 189 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 OR5AC1P0C628 307 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 IGHV4-38-2P0DP08 117 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 VSIG10L2P0DP72 767 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 PI3P19957 117 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 RPL15P61313 204 aaKnown RBP6.65□□□□□ -1.34
SYNE1-225ENST00000481502 RPL30P62888 115 aaKnown RBP6.65□□□□□ -1.34
SYNE1-225ENST00000481502 CYCSP99999 105 aaKnown RBP6.65□□□□□ -1.34
SYNE1-225ENST00000481502 SSX2Q16385 188 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 ZNF585BQ52M93 769 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 LDLRAD2Q5SZI1 272 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 CLEC9AQ6UXN8 241 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 LHFPL4Q7Z7J7 247 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 MOB3BQ86TA1 216 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 ZNF695Q8IW36 515 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 TEX45Q8NA69 505 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 NPBQ8NG41 125 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 OR51H1Q8NH63 302 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 CHAC2Q8WUX2 184 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 C5orf30Q96GV9 206 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 TP53RKQ96S44 253 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 MRPL20Q9BYC9 149 aaKnown RBP6.65□□□□□ -1.34
SYNE1-225ENST00000481502 OR51J1Q9H342 316 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 ZNRD1Q9P1U0 126 aa6.65□□□□□ -1.34
SYNE1-225ENST00000481502 VPS13CQ709C8 3753 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 A0A1B0GU03 582 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 CLDN34H7C241 214 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 H7C2Y5 167 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 TIMM23O14925 209 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 FGF16O43320 207 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 TNFSF12O43508 249 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 FCGR3BO75015 233 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 VENTXO95231 258 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 LY6G6DO95868 133 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 IL6RP08887 468 aaPredicted RBP6.64□□□□□ -1.35
SYNE1-225ENST00000481502 SPNP16150 400 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 MAS1LP35410 378 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 SRP14P37108 136 aaKnown RBP6.64□□□□□ -1.35
SYNE1-225ENST00000481502 LPAR6P43657 344 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 BRWD1-AS2P59051 145 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 ERVK-16P61578 105 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 LRRC75BQ2VPJ9 315 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 VMA21Q3ZAQ7 101 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 AARDQ4LEZ3 155 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 LIN54Q6MZP7 749 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 Q6YL49 198 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 SELENOHQ8IZQ5 122 aaKnown RBP6.64□□□□□ -1.35
SYNE1-225ENST00000481502 Q8N6K4 173 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 SSMEM1Q8WWF3 244 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 CAPSLQ8WWF8 208 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 RRNAD1Q96FB5 475 aaKnown RBP6.64□□□□□ -1.35
SYNE1-225ENST00000481502 SEC22AQ96IW7 307 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 RHOVQ96L33 236 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 SPIN2AQ99865 258 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 SPIN2BQ9BPZ2 258 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 BEX2Q9BXY8 128 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 ZFP57Q9NU63 452 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 FKBP11Q9NYL4 201 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 BET1LQ9NYM9 111 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 HILPDAQ9Y5L2 63 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 MMP24Q9Y5R2 645 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 TEX15Q9BXT5 2789 aa6.64□□□□□ -1.35
SYNE1-225ENST00000481502 OTOGQ6ZRI0 2925 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 A0A0U1RQK1 487 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 BTBD17A6NE02 478 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 MARCH11A6NNE9 402 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 SHOXO15266 292 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 OR2F2O95006 317 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 NDUFA3O95167 84 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 IER3P46695 156 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 DLX1P56177 255 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 UBE2KP61086 200 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 RPS16P62249 146 aaKnown RBP6.63□□□□□ -1.35
SYNE1-225ENST00000481502 SRSF4Q08170 494 aaKnown RBP6.63□□□□□ -1.35
SYNE1-225ENST00000481502 DIAPH2-AS1Q14236 149 aa6.63□□□□□ -1.35
SYNE1-225ENST00000481502 THOC7Q6I9Y2 204 aaKnown RBP6.63□□□□□ -1.35
SYNE1-225ENST00000481502 RBMS3Q6XE24 437 aaKnown RBP6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms