RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 IL5P05113 134 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 SNRNP70P08621 437 aaKnown RBP10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR4E1P0C645 316 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 SPNP16150 400 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 AKR1C4P17516 323 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 PAX6P26367 422 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 IER3P46695 156 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 PPP1R1AQ13522 171 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 SPAG16Q8N0X2 631 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR4C13Q8NGP0 309 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR2T10Q8NGZ9 312 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 OSR1Q8TAX0 266 aaPredicted RBP10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 SSMEM1Q8WWF3 244 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 TP53RKQ96S44 253 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 SSX3Q99909 188 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 TMEM222Q9H0R3 208 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 PLEKHA2Q9HB19 425 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 TCF19Q9Y242 345 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 KCNIP3Q9Y2W7 256 aa10.06□□□□□ -0.8
TRAPPC12-218ENST00000479897 IGHV3-72A0A0B4J1Y9 119 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 PIGBOS1A0A0B4J2F0 54 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 INMT-MINDY4F8WBC2 141 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 H3BUX3 64 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 RAMP3O60896 148 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 FCGR3BO75015 233 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 SPDEFO95238 335 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 SFT2D2O95562 160 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 HPRT1P00492 218 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 MOSP00540 346 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 IGKV1D-33P01593 117 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 IGKV1-33P01594 117 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 IGKV1-16P04430 117 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR5AC1P0C628 307 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 FAM106CPP0CH98 169 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 VSIG10L2P0DP72 767 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 ANXA3P12429 323 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 ANXA7P20073 488 aaKnown RBP10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 SRPXP78539 464 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 DHRS2Q13268 280 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 TMEM187Q14656 261 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 POU2AF1Q16633 256 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 TRIM16LQ309B1 348 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 ZNF585BQ52M93 769 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 LIAT1Q6ZQX7 453 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 C16orf82Q7Z2V1 217 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 LYG2Q86SG7 212 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 CADM3Q8N126 398 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 SIGLECL1Q8N7X8 197 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR8H1Q8NGG4 311 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 GLYATL2Q8WU03 294 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 CAPSLQ8WWF8 208 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 IL22RA2Q969J5 263 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 ZDHHC16Q969W1 377 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 EAF1Q96JC9 268 aaPredicted RBP10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 PITPNC1Q9UKF7 332 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 ZFHX3Q15911 3703 aa10.05□□□□□ -0.8
TRAPPC12-218ENST00000479897 C9orf170A2RU37 121 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 A6NDX4 124 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 CLDN34H7C241 214 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 H7C2Y5 167 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 NDUFA3O95167 84 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 DUS4LO95620 317 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 CDS2O95674 445 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 CRYZL1O95825 349 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 DHFRP00374 187 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 IFNA2P01563 188 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 HLA-AP01891 365 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 LGALS7P47929 136 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 LRTM2Q8N967 370 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 FLYWCH2Q96CP2 140 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 TMEM56Q96MV1 263 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 VPREB3Q9UKI3 123 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 TMEM56-RWDD3S4R434 201 aa10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 TEP1Q99973 2627 aaKnown RBP10.04□□□□□ -0.8
TRAPPC12-218ENST00000479897 A0A0A6YYJ9 748 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 A0A0B4J2A0 478 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 DUXBA0A1W2PPF3 345 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 C7orf66A4D0T2 115 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 BTBD17A6NE02 478 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR2F2O95006 317 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 S1PR2O95136 353 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 IGKV1-39P01597 117 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 IGHV4-59P01825 116 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 IGKV1D-39P04432 117 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 SERPINE2P07093 398 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 NQO2P16083 231 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 TMEM11P17152 192 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 VAMP1P23763 118 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 HILS1P60008 231 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 C4orf46Q504U0 113 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 FBLN7Q53RD9 439 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 OR2B11Q5JQS5 317 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 RBMS3Q6XE24 437 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 NPBQ8NG41 125 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 ZNF418Q8TF45 676 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 RBPMSQ93062 196 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 HARBI1Q96MB7 349 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 TSNAXQ99598 290 aaKnown RBP10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 AIFM2Q9BRQ8 373 aa10.03□□□□□ -0.8
TRAPPC12-218ENST00000479897 SHPKQ9UHJ6 478 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms