RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 FAM216BQ8N7L0 139 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 ZNF383Q8NA42 475 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 Q8NFD4 153 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 OR51D1Q8NGF3 324 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 NEK7Q8TDX7 302 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 DTD1Q8TEA8 209 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 ABHD5Q8WTS1 349 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 C22orf15Q8WYQ4 148 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 FAM46BQ96A09 425 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 SEH1LQ96EE3 360 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 BSCL2Q96G97 398 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 NKX3-1Q99801 234 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 ACTR3CQ9C0K3 210 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 MFFQ9GZY8 342 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 BANF2Q9H503 90 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 LPAR2Q9HBW0 351 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 SIRT7Q9NRC8 400 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 TAS2R8Q9NYW2 309 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CTSZQ9UBR2 303 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 RAB22AQ9UL26 194 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 ETV7Q9Y603 341 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 PDZD2O15018 2839 aa5.1□□□□□ -1.59
SF3B1-209ENST00000479532 FLNBO75369 2602 aaKnown RBP5.1□□□□□ -1.59
SF3B1-209ENST00000479532 CSMD2Q7Z408 3487 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 ITPR2Q14571 2701 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 POLQO75417 2590 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 PPIAL4CA0A0B4J2A2 164 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 hCG_1809904A0A1W2PP81 198 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 A0A1W2PPE2 198 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 A0A1W2PR64 198 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 A0A1W2PRV1 198 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 SMIM30A4D0T7 59 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CYSRT1A8MQ03 144 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 TMEM14DPA8MWL7 114 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 FAM157AC9JC47 383 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 J3QLI3 93 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 K7N7A8 449 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 SLC33A1O00400 549 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 HSPB6O14558 160 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 TNFRSF13BO14836 293 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 GEMIN2O14893 280 aaKnown RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 PHF1O43189 567 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 HSPA12AO43301 675 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 TXNL1O43396 289 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CD5LO43866 347 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 NDUFB6O95139 128 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CD5P06127 495 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 OR5AC1P0C628 307 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 IL2RGP31785 369 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 BMI1P35226 326 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 RBMXP38159 391 aaKnown RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CEBPDP49716 269 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 PPT1P50897 306 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CAV2P51636 162 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CCR6P51684 374 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CLDN12P56749 244 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 ARF6P62330 175 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 RPL31P62899 125 aaKnown RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 HOXA4Q00056 320 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 EDDM3AQ14507 147 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 ARL6IP1Q15041 203 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 TAF9Q16594 264 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 C2orf76Q3KRA6 126 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 TMEM88Q6PEY1 159 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CLEC9AQ6UXN8 241 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 ACOT7LQ6ZUV0 252 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 TRAPPC6BQ86SZ2 158 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 LYPD6Q86Y78 171 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 IZUMO1Q8IYV9 350 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 FAM185AQ8N0U4 392 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CIARTQ8N365 385 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 C11orf44Q8N8P7 122 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 ZNRF1Q8ND25 227 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 OR13C8Q8NGS7 320 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 C2CD4CQ8TF44 421 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CCDC107Q8WV48 283 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 RAB40AQ8WXH6 277 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 CORO2AQ92828 525 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 SLC25A28Q96A46 364 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 PTX4Q96A99 478 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 TMEM186Q96B77 213 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 MSI2Q96DH6 328 aaKnown RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 GFI1Q99684 422 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 NUDT16L1Q9BRJ7 211 aaKnown RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 ZNF2Q9BSG1 426 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 TM2D1Q9BX74 207 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 RAB9BQ9NP90 201 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 YAE1D1Q9NRH1 226 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 IL36RNQ9UBH0 155 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 DKK2Q9UBU2 259 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 ZNF107Q9UII5 783 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-209ENST00000479532 FAM96BQ9Y3D0 163 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 DOCK11Q5JSL3 2073 aa5.09□□□□□ -1.59
SF3B1-209ENST00000479532 TACC2O95359 2948 aa5.09□□□□□ -1.6
SF3B1-209ENST00000479532 A0A087WWC5 75 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 TRGV10A0A0A0MS01 117 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 IGHV2-70DA0A0C4DH43 119 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 A0A0G2JK05 382 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 TMEM272A0A1B0GTI8 110 aa5.08□□□□□ -1.6
SF3B1-209ENST00000479532 A0A1B0GW64 132 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms