RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 FGF17O60258 216 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 LIFP15018 202 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 TMEM50BP56557 158 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 FBLN7Q53RD9 439 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 TMEM177Q53S58 311 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 CGB2Q6NT52 195 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 OR51G1Q8NGK1 321 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 TMEM186Q96B77 213 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 UBE2E2Q96LR5 201 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 FOXB1Q99853 325 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 DERL1Q9BUN8 251 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 NTMQ9P121 344 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 INS-IGF2F8WCM5 200 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 TNFSF13O75888 250 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 INSP01308 110 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 MFAP2P55001 183 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 PSG6Q00889 435 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 LINC01545Q5VT33 79 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 FAM90A2PQ658T7 463 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 RIMKLAQ8IXN7 391 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 ZNF721Q8TF20 911 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 ARHGAP5-AS1Q96IT6 56 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 BEX4Q9NWD9 120 aaPredicted RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 COA3Q9Y2R0 106 aaPredicted RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 A0A1W2PPC1 479 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 FGF8P55075 233 aaPredicted RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 PDCD1Q15116 288 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 Q6ZNX1 250 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 GDF7Q7Z4P5 450 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 ZNF646O15015 1829 aaPredicted RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 PDCD11Q14690 1871 aaKnown RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 AKAP6Q13023 2319 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 C7orf77A4D0Y5 90 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 TMEM8BA6NDV4 472 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 ZFP36L2P47974 494 aaKnown RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 SOX8P57073 446 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 DNAJC19Q96DA6 116 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 WFDC6Q9BQY6 131 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 OR2H1Q9GZK4 316 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 PSORS1C1Q9UIG5 152 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 WDR81Q562E7 1941 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 COL2A1P02458 1487 aaPredicted RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 PPIAL4EA0A075B759 164 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 IGHV3OR16-12A0A075B7B8 117 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 PSMB11A5LHX3 300 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 NPIPB4C9JG80 1138 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 C9JVG2 144 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 PPIAL4DF5H284 164 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 PPIAL4FP0DN26 164 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 CAPZBP47756 277 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 RPL31P62899 125 aaKnown RBP4.72□□□□□ -1.65
USF3-202ENST00000478658 AMER3Q8N944 861 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 OTOSQ8NHW6 89 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 MARVELD1Q9BSK0 173 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 PRSS22Q9GZN4 317 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 PPIAL4AQ9Y536 164 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 NUP188Q5SRE5 1749 aa4.72□□□□□ -1.65
USF3-202ENST00000478658 IGHV1-69-2A0A0G2JMI3 117 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A10PA6NDY2 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A18PA6NE21 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A16PA6NEW6 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A20PA6NIJ5 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A8PA6NJQ4 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A7PA6NKC0 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A22PA8MWA6 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A12PA8MX19 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A5PA8MXJ8 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A23PA8MXZ1 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 NPIPB8E9PQR5 432 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 NPIPB9F8W1W9 429 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 NPIPB7O75200 414 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A15PP0C7V4 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A13PP0C7W8 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A14PP0C7W9 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM90A24PP0C7X0 464 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 DEFB110Q30KQ9 67 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 TMEM52BQ4KMG9 183 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 RIPPLY2Q5TAB7 128 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.71□□□□□ -1.65
USF3-202ENST00000478658 CLEC4CQ8WTT0 213 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 VSTM2LQ96N03 204 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 MED20Q9H944 212 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 FAM53CQ9NYF3 392 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 ZNF561-AS1K7EIQ3 104 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 DHHO43323 396 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 IL18BPO95998 194 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 TSPAN7P41732 249 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 ATP5J2P56134 94 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 DLK2Q6UY11 383 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 LRRC75AQ8NAA5 344 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 ZNF740Q8NDX6 193 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 AQP3Q92482 292 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 SIGLEC10Q96LC7 697 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 PRSS27Q9BQR3 290 aa4.71□□□□□ -1.65
USF3-202ENST00000478658 WRAP73Q9P2S5 460 aaPredicted RBP4.71□□□□□ -1.65
USF3-202ENST00000478658 B9A039 149 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 NDUFS5O43920 106 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 PNLIPP16233 465 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 GPX2P18283 190 aa4.71□□□□□ -1.66
USF3-202ENST00000478658 CBLN1P23435 193 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms