RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 SMCO1Q147U7 214 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 IL17RELQ6ZVW7 336 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 LYG1Q8N1E2 194 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 C11orf42Q8N5U0 333 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 ZNF439Q8NDP4 499 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 OR5M8Q8NGP6 311 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 CLDND2Q8NHS1 167 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 THAP6Q8TBB0 222 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 CAPSLQ8WWF8 208 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 TMEM230Q96A57 120 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 MALSU1Q96EH3 234 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 BEX1Q9HBH7 125 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 COA4Q9NYJ1 87 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 FKBP11Q9NYL4 201 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 DPM3Q9P2X0 92 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 RNF150Q9ULK6 438 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 ARFGEF3Q5TH69 2177 aa5.73□□□□□ -1.49
SHQ1-207ENST00000475558 C13orf42A0A1B0GVH6 325 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 A0A1B0GW55 424 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 HMSDA8MTL9 139 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 FAM90A26D6RGX4 464 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 MED6O75586 246 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 TSPAN9O75954 239 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 LY6HO94772 140 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 TOX4O94842 621 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 TGFAP01135 160 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 TFF1P04155 84 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 FGF2P09038 288 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 H2AFB1P0C5Y9 115 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 DUX4L2P0CJ85 424 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 DUX4L3P0CJ86 424 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 DUX4L4P0CJ87 422 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 DUX4L5P0CJ88 424 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 DUX4L6P0CJ89 424 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 DUX4L7P0CJ90 424 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 MMP9P14780 707 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 NQO2P16083 231 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 CCL3L1P16619 93 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 PI3P19957 117 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 PVALBP20472 110 aaPredicted RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 OMGP23515 440 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 PSMB6P28072 239 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 HTR1DP28221 377 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 LPAR6P43657 344 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 UBE2E1P51965 193 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 ZNF134P52741 427 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 DVL1P1P54792 670 aaPredicted RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 ATP5IP56385 69 aaPredicted RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 ERVK-16P61578 105 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 ARF6P62330 175 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 HOXA4Q00056 320 aaPredicted RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 CD83Q01151 205 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 GNMTQ14749 295 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 SLC9A3R2Q15599 337 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 LTC4SQ16873 150 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 ZFP69Q49AA0 526 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 MIDNQ504T8 468 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 PRAMEF5Q5TYX0 476 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 TMEM65Q6PI78 240 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 DUX4L9Q6RFH8 374 aaPredicted RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 ZNF833PQ6ZTB9 187 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 C8orf86Q6ZUL3 223 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 TCF23Q7RTU1 214 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 SELENOHQ8IZQ5 122 aaKnown RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 SPAG16Q8N0X2 631 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 OR8H3Q8N146 312 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 FGFRL1Q8N441 504 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 LINC01356Q8N9X3 169 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 OR4C13Q8NGP0 309 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 OR51H1Q8NH63 302 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 OR4S2Q8NH73 311 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 VSTM2AQ8TAG5 236 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 OSR1Q8TAX0 266 aaPredicted RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 LHX4Q969G2 390 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 ST6GAL2Q96JF0 529 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 FYTTD1Q96QD9 318 aaKnown RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 IFI27L2Q9H2X8 130 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 ONECUT1Q9UBC0 465 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 DUX4Q9UBX2 424 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 TBL2Q9Y4P3 447 aaKnown RBP5.72□□□□□ -1.49
SHQ1-207ENST00000475558 INSIG2Q9Y5U4 225 aa5.72□□□□□ -1.49
SHQ1-207ENST00000475558 MGAM2Q2M2H8 2515 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 IGHV2-26A0A0B4J1V2 119 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 IGHV3-43A0A0B4J1X8 118 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 A0A0B4J293 547 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 FAM25EA8MYX2 175 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 BUB1B-PAK6H3BSN5 160 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 M0R1X1 148 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 GOSR2O14653 212 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 IGLV1-47P01700 117 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 IGLV2-14P01704 120 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 IGHV3-43DP0DP04 118 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 SLC25A4P12235 298 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 CD1BP29016 333 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 BRS3P32247 399 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 SRP14P37108 136 aaKnown RBP5.71□□□□□ -1.5
SHQ1-207ENST00000475558 RPP30P78346 268 aaKnown RBP5.71□□□□□ -1.5
SHQ1-207ENST00000475558 PAX2Q02962 417 aa5.71□□□□□ -1.5
SHQ1-207ENST00000475558 ZNF816Q0VGE8 651 aaPredicted RBP5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms