RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 IL5P05113 134 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 IL3P08700 152 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 GAGE12FP0CL80 117 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 GAGE12GP0CL81 117 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 GAGE12IP0CL82 117 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 CT45A6P0DMU7 189 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 CT45A5P0DMU8 189 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 CT45A7P0DMV0 189 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 GAGE4Q13068 117 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 EDDM3AQ14507 147 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 CT45A1Q5HYN5 189 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 SLC35E4Q6ICL7 350 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 RPS19BP1Q86WX3 136 aaKnown RBP4.07□□□□□ -1.76
NPHP3-206ENST00000474871 ZNF695Q8IW36 515 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 CT45A3Q8NHU0 189 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 RASL11BQ9BPW5 248 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 MAP1LC3BQ9GZQ8 125 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 ATG5Q9H1Y0 275 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 OR10A2Q9H208 303 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 ARRDC1-AS1Q9H2J1 176 aa4.07□□□□□ -1.76
NPHP3-206ENST00000474871 KIAA1549LQ6ZVL6 1849 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 CDH23Q9H251 3354 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 KNL1Q8NG31 2342 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 TRBV6-7A0A0A0MS04 114 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 TRBV9A0A0B4J1U6 114 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 CD300LBA8K4G0 201 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 SNRPGP15A8MWD9 76 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 C9JAW5 83 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 C11orf98E9PRG8 122 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 GSTZ1O43708 216 aaPredicted RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 REG1AP05451 166 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 RBMXP38159 391 aaKnown RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 DLX6P56179 175 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 CLDN2P57739 230 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 TAS2R20P59543 309 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PRR20EP86478 221 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PRR20CP86479 221 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PRR20DP86480 221 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PRR20BP86481 221 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PRR20AP86496 221 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 ZFAND6Q6FIF0 208 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 DUX4L9Q6RFH8 374 aaPredicted RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 ZNF627Q7L945 461 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 ABHD12Q8N2K0 398 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 OR52E2Q8NGJ4 325 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 C11orf45Q8TAV5 145 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 RND1Q92730 232 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 FGF11Q92914 225 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 MRPL53Q96EL3 112 aaKnown RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 HIGD1AQ9Y241 93 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 NOTCH4Q99466 2003 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 USF1P22415 310 aaPredicted RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 EVI2AP22794 236 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PRPH2P23942 346 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 P2RY1P47900 373 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PRDX1Q06830 199 aaKnown RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 ZNF678Q5SXM1 525 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 MKXQ8IYA7 352 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 MFSD8Q8NHS3 518 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 DCUN1D4Q92564 292 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 GABARAPL3Q9BY60 117 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 MAP1LC3AQ9H492 121 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 ZNF442Q9H7R0 627 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PAM16Q9Y3D7 125 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 TRGV8A0A0C4DH27 118 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 TMEM129A0AVI4 362 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 C15orf61A6NNL5 157 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 SPRY3O43610 288 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 NTN1O95631 604 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PRH1P02810 166 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 SP1P08047 785 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PVRP15151 417 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 MYOD1P15172 320 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 MAGEA5P43359 124 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 PPICP45877 212 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 NXPH1P58417 271 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 TMEM183BQ1AE95 376 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 DEFB110Q30KQ9 67 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 ATOH7Q8N100 152 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 TMEM229BQ8NBD8 167 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 APOBEC4Q8WW27 367 aaKnown RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 MS4A6EQ96DS6 147 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 S100A16Q96FQ6 103 aaKnown RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 TNFRSF12AQ9NP84 129 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 LYRM2Q9NU23 88 aaPredicted RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 TAS2R5Q9NYW4 299 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 DHDHQ9UQ10 334 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 LSM5Q9Y4Y9 91 aaKnown RBP4.06□□□□□ -1.76
NPHP3-206ENST00000474871 CHD9Q3L8U1 2897 aa4.06□□□□□ -1.76
NPHP3-206ENST00000474871 FAM231BA6NCW3 169 aa4.05□□□□□ -1.76
NPHP3-206ENST00000474871 DCTN6O00399 190 aa4.05□□□□□ -1.76
NPHP3-206ENST00000474871 CD5LO43866 347 aa4.05□□□□□ -1.76
NPHP3-206ENST00000474871 NDUFB2O95178 105 aa4.05□□□□□ -1.76
NPHP3-206ENST00000474871 IGHG1P01857 330 aa4.05□□□□□ -1.76
NPHP3-206ENST00000474871 GDF5P43026 501 aa4.05□□□□□ -1.76
NPHP3-206ENST00000474871 NDUFV3P56181 108 aaKnown RBP4.05□□□□□ -1.76
NPHP3-206ENST00000474871 SSX8Q7RTT4 187 aa4.05□□□□□ -1.76
NPHP3-206ENST00000474871 SPATA12Q7Z6I5 190 aa4.05□□□□□ -1.76
NPHP3-206ENST00000474871 TMEM256Q8N2U0 113 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms