RNA–Protein interactions for RNA: ENST00000474426.1

UBR3-208, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 1 (best)

Gene UBR3, Length 4,066 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-208ENST00000474426 SCN9AQ15858 1988 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 TECPR2O15040 1411 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 CRB1P82279 1406 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 LAMB1P07942 1786 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 A0A0J9YW62 118 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 MYBPHLA2RUH7 354 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 M0R1B8 84 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 OVOL1O14753 267 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 CD59P13987 128 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 ARL2P36404 184 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 Q6Q795 121 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 C1orf174Q8IYL3 243 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 OR51E1Q8TCB6 317 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 SCRT1Q9BWW7 348 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 AK3Q9UIJ7 227 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 NFAT5O94916 1531 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 BRCA1P38398 1863 aaKnown RBP2.86□□□□□ -1.95
UBR3-208ENST00000474426 TCRBV9S1A1TA0A576 114 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 GGT3PA6NGU5 568 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 OOSP1A8MZH6 123 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 GGTLC3B5MD39 225 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 HSPB6O14558 160 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 CYB5AP00167 134 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 TNFP01375 233 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 HIST1H1DP16402 221 aaKnown RBP2.86□□□□□ -1.95
UBR3-208ENST00000474426 CRYBB3P26998 211 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 CLEC12BQ2HXU8 276 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 ZNF718Q3SXZ3 478 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 C19orf54Q5BKX5 351 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 LCN10Q6JVE6 187 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 LCN15Q6UWW0 184 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 TMEM64Q6YI46 380 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 Q6ZRG5 221 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 SHISA6Q6ZSJ9 500 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 Q6ZWC4 215 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 AMIGO3Q86WK7 504 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 MMD2Q8IY49 270 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 C3orf56Q8N813 242 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 SUMF1Q8NBK3 374 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 ZNF502Q8TBZ5 544 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 ZNF503Q96F45 646 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 DPH3Q96FX2 82 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 ULBP3Q9BZM4 244 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 TXNL4BQ9NX01 149 aaKnown RBP2.86□□□□□ -1.95
UBR3-208ENST00000474426 FANCMQ8IYD8 2048 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 ZNF646O15015 1829 aaPredicted RBP2.86□□□□□ -1.95
UBR3-208ENST00000474426 M0R129 80 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 KLK2P20151 261 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 FOXF1Q12946 379 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 ZNF345Q14585 488 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 SPANXN3Q5MJ09 141 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 C8orf82Q6P1X6 216 aaPredicted RBP2.86□□□□□ -1.95
UBR3-208ENST00000474426 HSD11B1LQ7Z5J1 315 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 BCDIN3DQ7Z5W3 292 aaKnown RBP2.86□□□□□ -1.95
UBR3-208ENST00000474426 OR4K17Q8NGC6 315 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 CT55Q8WUE5 264 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 FMC1Q96HJ9 113 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 GNB1LQ9BYB4 327 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 CHST6Q9GZX3 395 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 SDR39U1Q9NRG7 319 aaPredicted RBP2.86□□□□□ -1.95
UBR3-208ENST00000474426 MYLKQ15746 1914 aa2.86□□□□□ -1.95
UBR3-208ENST00000474426 COL22A1Q8NFW1 1626 aaPredicted RBP2.86□□□□□ -1.95
UBR3-208ENST00000474426 IGLV3-22A0A075B6J6 115 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 A0A0U1RQV1 116 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 RENP00797 406 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 SP4Q02446 784 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 FOXI1Q12951 378 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF726P1Q15940 193 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 MPV17L2Q567V2 206 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 TCEAL5Q5H9L2 206 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 C11orf87Q6NUJ2 197 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF880Q6PDB4 577 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 PRIMA1Q86XR5 153 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 KLHDC1Q8N7A1 406 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 OR4C16Q8NGL9 310 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 TMEM170AQ8WVE7 144 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 TWIST2Q8WVJ9 160 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 DNAJA3Q96EY1 480 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF670Q9BS34 389 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 OR10A2Q9H208 303 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF331Q9NQX6 463 aaPredicted RBP2.85□□□□□ -1.95
UBR3-208ENST00000474426 CLTCQ00610 1675 aaKnown RBP2.85□□□□□ -1.95
UBR3-208ENST00000474426 ATP7AQ04656 1500 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 MUC21A0A140T8X8 626 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 FAM240AA0A1B0GVK7 77 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ARRDC5A6NEK1 342 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF860A6NHJ4 632 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 C9orf118A6NHY6 69 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 NDUFB4O95168 129 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 PFN2P35080 140 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 PPP1CBP62140 327 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 MUC21Q5SSG8 566 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 ZNF550Q7Z398 422 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 C11orf53Q8IXP5 236 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 CIARTQ8N365 385 aaPredicted RBP2.85□□□□□ -1.95
UBR3-208ENST00000474426 LRTM2Q8N967 370 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 APOBEC4Q8WW27 367 aaKnown RBP2.85□□□□□ -1.95
UBR3-208ENST00000474426 RARRES2Q99969 163 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 FOXQ1Q9C009 403 aa2.85□□□□□ -1.95
UBR3-208ENST00000474426 REEP1Q9H902 201 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms