RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 GCNT2Q8N0V5 402 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GABRG1Q8N1C3 465 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 C17orf78Q8N4C9 275 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SLC22A24Q8N4F4 322 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TOMM5Q8N4H5 51 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF525Q8N782 197 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM229BQ8NBD8 167 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 RELL2Q8NC24 303 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CHST4Q8NCG5 386 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 BHLHE23Q8NDY6 225 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 STEAP2Q8NFT2 490 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR10AD1Q8NGE0 317 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR51S1Q8NGJ8 323 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR5D14Q8NGL3 314 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR1K1Q8NGR3 316 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR6N1Q8NGY5 312 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR13G1Q8NGZ3 307 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR8S1Q8NH09 359 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR1F12Q8NHA8 337 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZFAND1Q8TCF1 268 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TNFAIP8L1Q8WVP5 186 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PCNPQ8WW12 178 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GTSF1Q8WW33 167 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 MAFIPQ8WZ33 124 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 THRSPQ92748 146 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 EMG1Q92979 244 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SPTSSAQ969W0 71 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CPNE4Q96A23 557 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM230Q96A57 120 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PTX4Q96A99 478 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PNPLA2Q96AD5 504 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 APH1AQ96BI3 265 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SGK3Q96BR1 496 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 MRPL48Q96GC5 212 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 C5orf30Q96GV9 206 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 REEP6Q96HR9 211 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF488Q96MN9 340 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GPR137Q96N19 417 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF75AQ96N20 296 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 RBP7Q96R05 134 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SLC6A7Q99884 636 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 MICU1Q9BPX6 476 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 FAM173AQ9BQD7 235 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SULT4A1Q9BR01 284 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 UQCC2Q9BRT2 126 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 GINS4Q9BRT9 223 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ATG101Q9BSB4 218 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TM2D1Q9BX74 207 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM59Q9BXS4 323 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CACNG6Q9BXT2 260 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PECRQ9BY49 303 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 LINC00470Q9BZP3 86 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CHST6Q9GZX3 395 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 CST11Q9H112 138 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ATG5Q9H1Y0 275 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR51B6Q9H340 312 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OR51J1Q9H342 316 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 LIME1Q9H400 295 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SRD5A3Q9H8P0 318 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 RNF122Q9H9V4 155 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PLEKHA3Q9HB20 300 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 WFDC1Q9HC57 220 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 NEK6Q9HC98 313 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TMEM138Q9NPI0 162 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PAQR5Q9NXK6 330 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 SLC2A8Q9NY64 477 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PLEK2Q9NYT0 353 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PTTG3PQ9NZH4 202 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF629Q9UEG4 869 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 OPN4Q9UHM6 478 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF230Q9UIE0 474 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TEKT2Q9UIF3 430 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 MGAT4AQ9UM21 535 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 PIGLQ9Y2B2 252 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TP53TG5Q9Y2B4 290 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 KLF13Q9Y2Y9 288 aaPredicted RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 NOSIPQ9Y314 301 aaKnown RBP1.07□□□□□ -2.24
CCDC39-203ENST00000473854 FAM215AQ9Y5M1 114 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 TENM3Q9P273 2699 aa1.07□□□□□ -2.24
CCDC39-203ENST00000473854 RYR3Q15413 4870 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PKD1P98161 4303 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 A0A087X0K7 114 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ARPC4-TTLL3A0A0A6YYG9 625 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IGHV2OR16-5A0A0B4J2B6 119 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IGHV1-18A0A0C4DH31 117 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IGKV1-6A0A0C4DH72 117 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 IGHV3-64DA0A0J9YX35 117 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 ZNF816-ZNF321PA0A0X1KG74 233 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 TEX48A0A1B0GUV7 120 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 A0A1B0GW55 424 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 FAM230AA0A1W2PPH8 454 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 PQLC2LA1A4F0 135 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 C9orf170A2RU37 121 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 C5orf49A4QMS7 147 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 RNF222A6NCQ9 220 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 NAP1L6A6NFF2 107 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OOEPA6NGQ2 149 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR5H14A6NHG9 310 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 OR6C65A6NJZ3 312 aa1.06□□□□□ -2.24
CCDC39-203ENST00000473854 SLC22A20A6NK97 555 aa1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms