RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 MOSP00540 346 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 RFX2P48378 723 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 HERV-K104P61576 105 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 MSMO1Q15800 293 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 FAM71E2Q8N5Q1 922 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 KLHDC1Q8N7A1 406 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 OR5AN1Q8NGI8 311 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 OR2T10Q8NGZ9 312 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 ZFAND1Q8TCF1 268 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 S1PR3Q99500 378 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 PRSS22Q9GZN4 317 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 OR2D2Q9H210 308 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 GAB2Q9UQC2 676 aa10.38□□□□□ -0.75
TPM3-216ENST00000473036 RBM7Q9Y580 266 aaKnown RBP10.38□□□□□ -0.75
TPM3-216ENST00000473036 PIGBOS1A0A0B4J2F0 54 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 FAM240BA0A1B0GVZ2 78 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 FGF16O43320 207 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 PTTG1O95997 202 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 IGKV1-16P04430 117 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 FCGR2CP31995 323 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 GPR12P47775 334 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 LUMP51884 338 aaPredicted RBP10.37□□□□□ -0.75
TPM3-216ENST00000473036 UCP3P55916 312 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 EIF4EBP1Q13541 118 aaPredicted RBP10.37□□□□□ -0.75
TPM3-216ENST00000473036 RGS21Q2M5E4 152 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 ZNF660Q6AZW8 331 aaPredicted RBP10.37□□□□□ -0.75
TPM3-216ENST00000473036 C11orf44Q8N8P7 122 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 POC5Q8NA72 575 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 MINDY2Q8NBR6 621 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 ZBTB34Q8NCN2 500 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 OR4C16Q8NGL9 310 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 OR2T6Q8NHC8 308 aa10.37□□□□□ -0.75
TPM3-216ENST00000473036 ZNF486Q96H40 463 aaPredicted RBP10.37□□□□□ -0.75
TPM3-216ENST00000473036 LINC00473A8K010 186 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 M0QYG6 137 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 M0R1X1 148 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 VSIG10L2P0DP72 767 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 AADACP22760 399 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 VDAC2P45880 294 aaPredicted RBP10.36□□□□□ -0.75
TPM3-216ENST00000473036 RBMS2Q15434 407 aaKnown RBP10.36□□□□□ -0.75
TPM3-216ENST00000473036 SCGB2B2Q4G0G5 96 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 IDO2Q6ZQW0 420 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 CMTM1Q8IZ96 169 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.36□□□□□ -0.75
TPM3-216ENST00000473036 ENKURQ8TC29 256 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 DDB2Q92466 427 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 AKR1E2Q96JD6 320 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 GPHA2Q96T91 129 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 HSPB9Q9BQS6 159 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 ZNF2Q9BSG1 426 aaPredicted RBP10.36□□□□□ -0.75
TPM3-216ENST00000473036 TINAGL1Q9GZM7 467 aaPredicted RBP10.36□□□□□ -0.75
TPM3-216ENST00000473036 LINC00527Q9UJ94 153 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 ZNF221Q9UK13 617 aa10.36□□□□□ -0.75
TPM3-216ENST00000473036 NCBP2LA6PVI3 153 aaKnown RBP10.35□□□□□ -0.75
TPM3-216ENST00000473036 PLA2G10O15496 165 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 PPYP01298 95 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 IGHG2P01859 326 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 CD28P10747 220 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 SLC6A1P30531 599 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 DUTP33316 252 aaKnown RBP10.35□□□□□ -0.75
TPM3-216ENST00000473036 BRWD1-AS2P59051 145 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 RPL30P62888 115 aaKnown RBP10.35□□□□□ -0.75
TPM3-216ENST00000473036 TCTEX1D4Q5JR98 221 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 C9orf152Q5JTZ5 239 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 SLC38A6Q8IZM9 456 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 DUSP18Q8NEJ0 188 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 NPBQ8NG41 125 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 OR51S1Q8NGJ8 323 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 MOB3AQ96BX8 217 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 NOL4LQ96MY1 436 aaPredicted RBP10.35□□□□□ -0.75
TPM3-216ENST00000473036 TNCP24821 2201 aa10.35□□□□□ -0.75
TPM3-216ENST00000473036 TET2Q6N021 2002 aaPredicted RBP10.34□□□□□ -0.75
TPM3-216ENST00000473036 LINC00854A0A1B0GVQ3 168 aa10.34□□□□□ -0.75
TPM3-216ENST00000473036 OR5H14A6NHG9 310 aa10.34□□□□□ -0.75
TPM3-216ENST00000473036 ADARB2-AS1A8MUL3 147 aa10.34□□□□□ -0.75
TPM3-216ENST00000473036 M0QZK8 103 aa10.34□□□□□ -0.75
TPM3-216ENST00000473036 B3GALNT1O75752 331 aa10.34□□□□□ -0.75
TPM3-216ENST00000473036 NDUFA3O95167 84 aa10.34□□□□□ -0.75
TPM3-216ENST00000473036 TAGLNQ01995 201 aaKnown RBP10.34□□□□□ -0.75
TPM3-216ENST00000473036 PLET1Q6UQ28 207 aa10.34□□□□□ -0.75
TPM3-216ENST00000473036 LHFPL1Q86WI0 220 aa10.34□□□□□ -0.75
TPM3-216ENST00000473036 LIN7CQ9NUP9 197 aaKnown RBP10.34□□□□□ -0.75
TPM3-216ENST00000473036 C14orf166Q9Y224 244 aaKnown RBP10.34□□□□□ -0.75
TPM3-216ENST00000473036 NUBP2Q9Y5Y2 271 aa10.34□□□□□ -0.75
TPM3-216ENST00000473036 SRRM4A7MD48 611 aaKnown RBP10.33□□□□□ -0.76
TPM3-216ENST00000473036 FCN1O00602 326 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 NDUFB6O95139 128 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 IGLV2-23P01705 113 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 ZNF735P0CB33 412 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 TAS2R31P59538 309 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 UBE2MP61081 183 aaKnown RBP10.33□□□□□ -0.76
TPM3-216ENST00000473036 NDPQ00604 133 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 IFITM3Q01628 133 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 MMDQ15546 238 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 MRGPRG-AS1Q2M3A8 158 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 ZNF645Q8N7E2 425 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 TCTEX1D1Q8N7M0 179 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 CCDC71LQ8N9Z2 235 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 ADTRPQ96IZ2 230 aa10.33□□□□□ -0.76
TPM3-216ENST00000473036 CCL28Q9NRJ3 127 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms