RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 BPGMP07738 259 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 RAP1GDS1P52306 607 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 RBM11P57052 281 aaKnown RBP1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 TBPL1P62380 186 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 TPM4P67936 248 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 PACRGLQ8N7B6 248 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 OR13C8Q8NGS7 320 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 EEF1AKMT1Q8WVE0 214 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 SFRP2Q96HF1 295 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 BABAM2Q9NXR7 383 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 TAAR3PQ9P1P4 343 aa1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 POLR3HQ9Y535 204 aaPredicted RBP1.79□□□□□ -2.12
PRPF40A-208ENST00000472760 STRCP1A6NGW2 1772 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 KDM5BQ9UGL1 1544 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 GRIN2BQ13224 1484 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 TMED7-TICAM2A0A0A6YYA0 188 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 TRAV41A0A0B4J266 112 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 SIGLEC16A6NMB1 481 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 BHLHE40O14503 412 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 DDTP30046 118 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 PLPPR5Q32ZL2 321 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 LGALS9BQ3B8N2 356 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 CST9Q5W186 159 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 TNFAIP8L2Q6P589 184 aaPredicted RBP1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 SLC51BQ86UW2 128 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 UBL4BQ8N7F7 174 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 SMCR5Q8TEV8 140 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 RNASE6Q93091 150 aaKnown RBP1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 TIMM21Q9BVV7 248 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 ZNHIT6Q9NWK9 470 aaKnown RBP1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 HHLA3Q9XRX5 114 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 C15orf41Q9Y2V0 281 aa1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 KLK5Q9Y337 293 aaPredicted RBP1.78□□□□□ -2.12
PRPF40A-208ENST00000472760 DENND4BO75064 1496 aaPredicted RBP1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 A0A087WUU8 490 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 A0A1B0GVG6 124 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 RFPL4AA6NLU0 287 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 RFPL4AL1F8VTS6 287 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 PFDN6O15212 129 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 TYMSP04818 313 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 CTBP2P56545 445 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 PPP1R1AQ13522 171 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 TPRXLQ17RH7 258 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 Q6ZTI0 123 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 RAB2BQ8WUD1 216 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 LLPHQ9BRT6 129 aaKnown RBP1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 ATP6V1DQ9Y5K8 247 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 DSCAML1Q8TD84 2053 aa1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 COL11A1P12107 1806 aaPredicted RBP1.77□□□□□ -2.13
PRPF40A-208ENST00000472760 HLA-DRAP01903 254 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 APOEP02649 317 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 GPX1P07203 203 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 OCM2P0CE71 109 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 COX5BP10606 129 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 BLVRAP53004 296 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 SAPCD1Q5SSQ6 148 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 FAM151BQ6UXP7 276 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 JOSD2Q8TAC2 188 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 TTTY13Q9BZ97 58 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 DKKL1Q9UK85 242 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 POLR1DQ9Y2S0 133 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 TRPM6Q9BX84 2022 aa1.76□□□□□ -2.13
PRPF40A-208ENST00000472760 PLXNA3P51805 1871 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 TMSB15BA0A087X1C1 80 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 C9JCJ5 164 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 IL3P08700 152 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 EMP2P54851 167 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 TAS2R20P59543 309 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 TMEM258P61165 79 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 RELAQ04206 551 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 SLC36A2Q495M3 483 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 RASSF6Q6ZTQ3 369 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 HAVCR2Q8TDQ0 301 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 CCL13Q99616 98 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 MAP1LC3AQ9H492 121 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 NKIRAS1Q9NYS0 192 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 ICE1Q9Y2F5 2266 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
PRPF40A-208ENST00000472760 ZNF532Q9HCE3 1301 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 KLRC4O43908 158 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 APOMO95445 188 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 CCR2P41597 374 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 SLCO1A2P46721 670 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 FXYD7P58549 80 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 AP1S1P61966 158 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 FKBP1AP62942 108 aaKnown RBP1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 MLLT11Q13015 90 aaPredicted RBP1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 COTL1Q14019 142 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 FAM78BQ5VT40 261 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 SBSNQ6UWP8 590 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 COMMD7Q86VX2 200 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 LRRC28Q86X40 367 aaPredicted RBP1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 GPHB5Q86YW7 130 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 OR2T27Q8NH04 317 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 ZNF675Q8TD23 568 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 GNPNAT1Q96EK6 184 aaPredicted RBP1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 HRASLSQ9HDD0 168 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 FGFR1OP2Q9NVK5 253 aa1.74□□□□□ -2.13
PRPF40A-208ENST00000472760 M0QZ92 97 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms