RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 KCTD4Q8WVF5 259 aa1.78□□□□□ -2.12
XRN1-210ENST00000472697 RBPMSQ93062 196 aaKnown RBP1.78□□□□□ -2.12
XRN1-210ENST00000472697 PDXPQ96GD0 296 aa1.78□□□□□ -2.12
XRN1-210ENST00000472697 SDHCQ99643 169 aaPredicted RBP1.78□□□□□ -2.12
XRN1-210ENST00000472697 PITX2Q99697 317 aa1.78□□□□□ -2.12
XRN1-210ENST00000472697 PTPRQQ9UMZ3 2332 aa1.78□□□□□ -2.12
XRN1-210ENST00000472697 ZNF106Q9H2Y7 1883 aaKnown RBP1.78□□□□□ -2.13
XRN1-210ENST00000472697 CACNA1EQ15878 2313 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 A0A0U1RQV1 116 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 CENPBD1B2RD01 187 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 ZNF878C9JN71 531 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 TMX2-CTNND1H3BSU7 103 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 MRASO14807 208 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 MYL12BO14950 172 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 SOX14O95416 240 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 HLA-DQB1P01920 261 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 DTYMKP23919 212 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 TAS2R41P59536 307 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 KRTAP10-11P60412 298 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 MRGPRG-AS1Q2M3A8 158 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 TTMPQ5BVD1 217 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 COA6Q5JTJ3 125 aaKnown RBP1.77□□□□□ -2.13
XRN1-210ENST00000472697 FAM78AQ5JUQ0 283 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 OGFRL1Q5TC84 451 aaPredicted RBP1.77□□□□□ -2.13
XRN1-210ENST00000472697 KRTCAP2Q8N6L1 136 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 ST6GALNAC3Q8NDV1 305 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 OR9I1Q8NGQ6 314 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 Q8WTZ3 238 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 TNFAIP8L1Q8WVP5 186 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 APOBEC3DQ96AK3 386 aaPredicted RBP1.77□□□□□ -2.13
XRN1-210ENST00000472697 SPANXB1Q9NS25 103 aaPredicted RBP1.77□□□□□ -2.13
XRN1-210ENST00000472697 CELA1Q9UNI1 258 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 DNAH12Q6ZR08 3092 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 URB1O60287 2271 aaKnown RBP1.77□□□□□ -2.13
XRN1-210ENST00000472697 NACAE9PAV3 2078 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 IGHV3-64DA0A0J9YX35 117 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 CLDN24A6NM45 220 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 FADS1O60427 444 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 APCSP02743 223 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 IL6P05231 212 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 SOD3P08294 240 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 OR4E1P0C645 316 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 CD99P14209 185 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 CBX5P45973 191 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 GZMMP51124 257 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 ZNF133P52736 654 aaPredicted RBP1.77□□□□□ -2.13
XRN1-210ENST00000472697 ESRRGP62508 458 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 BTN3A2P78410 334 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 KIAA0040Q15053 153 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 SSX1Q16384 188 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 ABCA11PQ4W5N1 156 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 TRMT12Q53H54 448 aaKnown RBP1.77□□□□□ -2.13
XRN1-210ENST00000472697 GLT6D1Q7Z4J2 308 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 SLC25A45Q8N413 288 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 CLDN22Q8N7P3 220 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 OR1L8Q8NGR8 309 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 C2orf15Q8WU43 125 aaKnown RBP1.77□□□□□ -2.13
XRN1-210ENST00000472697 ANKRD9Q96BM1 317 aaPredicted RBP1.77□□□□□ -2.13
XRN1-210ENST00000472697 TAMM41Q96BW9 452 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 DIRAS2Q96HU8 199 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 EBPLQ9BY08 206 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 LINC00574Q9H8X3 128 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 SLC2A9Q9NRM0 540 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 MED29Q9NX70 200 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 PI4KAP42356 2102 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 F5P12259 2224 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 SDK2Q58EX2 2172 aa1.77□□□□□ -2.13
XRN1-210ENST00000472697 CDH23Q9H251 3354 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 IGHV5-51A0A0C4DH38 117 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 IGHV5-10-1A0A0J9YXX1 117 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 A0A1B0GUA9 196 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 M0R036 132 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 PRTN3P24158 256 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 MIPP30301 263 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 RCVRNP35243 200 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 CEBPGP53567 150 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 DSCR10P59022 87 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 SPCS3P61009 180 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 PSME3P61289 254 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 HERVK_113P63121 156 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 CCL7P80098 99 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 BSPH1Q075Z2 132 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 PSG7Q13046 419 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 TOMM34Q15785 309 aaPredicted RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 C15orf32Q32M92 178 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 HENMT1Q5T8I9 393 aaKnown RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 LAMTOR1Q6IAA8 161 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 LYG2Q86SG7 212 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 MDP1Q86V88 176 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 TMEM256Q8N2U0 113 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 OR2Z1Q8NG97 314 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 OR11G2Q8NGC1 345 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 ABHD3Q8WU67 409 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 REEP6Q96HR9 211 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 RILPQ96NA2 401 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 MRPS26Q9BYN8 205 aaKnown RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 ENY2Q9NPA8 101 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 FKBP14Q9NWM8 211 aa1.76□□□□□ -2.13
XRN1-210ENST00000472697 NUFIP1Q9UHK0 495 aaKnown RBP1.76□□□□□ -2.13
XRN1-210ENST00000472697 FAM32AQ9Y421 112 aaKnown RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 273.2 ms