RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
UBXN11-213ENST00000472155 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-213ENST00000472155 TNFAIP6P98066 277 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-213ENST00000472155 FLI1Q01543 452 aaPredicted RBP12.43□□□□□ -0.42
UBXN11-213ENST00000472155 TAF15Q92804 592 aaKnown RBP eCLIP12.43□□□□□ -0.42
UBXN11-213ENST00000472155 R3HDM4Q96D70 268 aa12.43□□□□□ -0.42
UBXN11-213ENST00000472155 TMPRSS5Q9H3S3 457 aa12.43□□□□□ -0.42
UBXN11-213ENST00000472155 CALYQ9NYX4 217 aa12.43□□□□□ -0.42
UBXN11-213ENST00000472155 A0A1B0GW64 132 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 H3BQ15 152 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 CFHR2P36980 270 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 HBG1P69891 147 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 HBG2P69892 147 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 CTAG1AP78358 180 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 HABP2Q14520 560 aaPredicted RBP12.42□□□□□ -0.42
UBXN11-213ENST00000472155 AVPI1Q5T686 147 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 RPP25LQ8N5L8 163 aaKnown RBP12.42□□□□□ -0.42
UBXN11-213ENST00000472155 PRELID3BQ9Y3B1 194 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 DPRXA6NFQ7 191 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 CEBPZOSA8MTT3 80 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 MKRN2OSH3BPM6 223 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 ADH4P08319 380 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 TLE4Q04727 773 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 CT45A1Q5HYN5 189 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 CT45A3Q8NHU0 189 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 RAB39BQ96DA2 213 aa12.42□□□□□ -0.42
UBXN11-213ENST00000472155 THBDP07204 575 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 CGB3P0DN86 165 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 CGB7P0DN87 165 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 MYOD1P15172 320 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 GZMHP20718 246 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 RPL35P42766 123 aaKnown RBP12.41□□□□□ -0.42
UBXN11-213ENST00000472155 RAB13P51153 203 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 RPS23P62266 143 aaKnown RBP12.41□□□□□ -0.42
UBXN11-213ENST00000472155 MSMO1Q15800 293 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 ZNF787Q6DD87 383 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 HSD17B10Q99714 261 aaKnown RBP12.41□□□□□ -0.42
UBXN11-213ENST00000472155 FAM90A26D6RGX4 464 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 RAB29O14966 203 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 NDUFA2O43678 99 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 FCN3O75636 299 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 PAX5Q02548 391 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 ZNF506Q5JVG8 444 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 ZNF343Q6P1L6 599 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 ZNF66Q6ZN08 573 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 GATAD1Q8WUU5 269 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 GAFA1Q96PS6 74 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 NCOR2Q9Y618 2525 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 GNG10P50151 68 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 KRTCAP3Q53RY4 240 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 SPACA3Q8IXA5 215 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 LINC00518Q8N0U6 118 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 SLC25A22Q9H936 323 aa12.41□□□□□ -0.42
UBXN11-213ENST00000472155 LOC102723971A0A1B0GUV8 181 aa12.4□□□□□ -0.42
UBXN11-213ENST00000472155 C15orf62A8K5M9 175 aa12.4□□□□□ -0.42
UBXN11-213ENST00000472155 MZT1Q08AG7 82 aa12.4□□□□□ -0.42
UBXN11-213ENST00000472155 STUMQ69YW2 141 aa12.4□□□□□ -0.42
UBXN11-213ENST00000472155 ADAM5Q6NVV9 412 aa12.4□□□□□ -0.42
UBXN11-213ENST00000472155 ZNF429Q86V71 674 aa12.4□□□□□ -0.42
UBXN11-213ENST00000472155 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.42
UBXN11-213ENST00000472155 RNF7Q9UBF6 113 aa12.4□□□□□ -0.42
UBXN11-213ENST00000472155 JPT1Q9UK76 154 aa12.4□□□□□ -0.42
UBXN11-213ENST00000472155 F2RL2O00254 374 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 YPEL1O60688 119 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 AKR1D1P51857 326 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 RAB11AP62491 216 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 BSPH1Q075Z2 132 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 CR1LQ2VPA4 569 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 GCSAMLQ5JQS6 135 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 C1orf174Q8IYL3 243 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 NEUROG1Q92886 237 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 YPEL2Q96QA6 119 aa12.4□□□□□ -0.43
UBXN11-213ENST00000472155 SAA2-SAA4A0A096LPE2 208 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 IFNA17P01571 189 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 SAA2P0DJI9 122 aaPredicted RBP12.39□□□□□ -0.43
UBXN11-213ENST00000472155 FGF7P21781 194 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 GFRALQ6UXV0 394 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 C15orf54Q8N8G6 183 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 EGLN1Q9GZT9 426 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 URGCP-MRPS24S4R325 110 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 PIGBOS1A0A0B4J2F0 54 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 BTBD17A6NE02 478 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 FAM87AP0C7U9 286 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 DLK1P80370 383 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 ADIPOQQ15848 244 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 PRAMEF5Q5TYX0 476 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 FAM222BQ8WU58 562 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 EDARADDQ8WWZ3 215 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 PSMG3Q9BT73 122 aaPredicted RBP12.39□□□□□ -0.43
UBXN11-213ENST00000472155 OR6C3Q9NZP0 311 aa12.39□□□□□ -0.43
UBXN11-213ENST00000472155 HRNRQ86YZ3 2850 aaPredicted RBP12.38□□□□□ -0.43
UBXN11-213ENST00000472155 MAP1LC3B2A6NCE7 125 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 PRRG2O14669 202 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 OR4A8P0C604 315 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 GATA4P43694 442 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 TMEM41BQ5BJD5 291 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 FAM90A2PQ658T7 463 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 ABHD12Q8N2K0 398 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 TMEM170AQ8WVE7 144 aa12.38□□□□□ -0.43
UBXN11-213ENST00000472155 ZNF251Q9BRH9 671 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms