RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 TP53RKQ96S44 253 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 TXNDC17Q9BRA2 123 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 NPIPB9F8W1W9 429 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 KLF4O43474 513 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 RAMP1O60894 148 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 THY1P04216 161 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 IFITM2Q01629 132 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 TIMM23BQ5SRD1 257 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 TMEM78Q5T7P6 136 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 MUC15Q8N387 334 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 MARCH11A6NNE9 402 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 CELA3AP09093 270 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 PCSK4Q6UW60 755 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 IL36RNQ9UBH0 155 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 CACNA1IQ9P0X4 2223 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 A0A1B0GV72 72 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 OR2A4O95047 310 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 RND2P52198 227 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 CHAC2Q8WUX2 184 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 TAF15Q92804 592 aaKnown RBP eCLIP13.49□□□□□ -0.25
BRAT1-204ENST00000469750 OR2A7Q96R45 310 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 SLC25A33Q9BSK2 321 aa13.49□□□□□ -0.25
BRAT1-204ENST00000469750 LOC105371242A0A075B767 164 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 TGFBR3LH3BV60 316 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 CEACAM1P13688 526 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 ZNF137PP52743 207 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 EBLN2Q6P2I7 272 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 CYB561D1Q8N8Q1 229 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 TMEM186Q96B77 213 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 GREB1LQ9C091 1923 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-204ENST00000469750 GLRXP35754 106 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 AKIRIN1Q9H9L7 192 aaPredicted RBP13.48□□□□□ -0.25
BRAT1-204ENST00000469750 PLXNA1Q9UIW2 1896 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 SNRPCP09234 159 aaKnown RBP13.48□□□□□ -0.25
BRAT1-204ENST00000469750 WDFY1Q8IWB7 410 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 STPG3Q8N7X2 389 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 C16orf92Q96LL3 132 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 C5orf66Q9H5L9 145 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 LIPFP07098 398 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 BPIFA4PQ86YQ2 179 aa13.48□□□□□ -0.25
BRAT1-204ENST00000469750 ZCCHC14Q8WYQ9 949 aaKnown RBP13.48□□□□□ -0.25
BRAT1-204ENST00000469750 PQLC2Q6ZP29 291 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 LEAP2Q969E1 77 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 GPHA2Q96T91 129 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 NRIP2Q9BQI9 281 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 CLEC7AQ9BXN2 247 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 HKR1P10072 659 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 PDLIM4P50479 330 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 MFAP4P55083 255 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 TNFRSF9Q07011 255 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 LAIR2Q6ISS4 152 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 OR4C13Q8NGP0 309 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 OR10J6PQ8NGY7 276 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 SMIM12Q96EX1 92 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 A8MWL6 223 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 MIC13Q5XKP0 118 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 C19orf48Q6RUI8 117 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 SGMS2Q8NHU3 365 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 TLNRD1Q9H1K6 362 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 PLAUP00749 431 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 TFPI2P48307 235 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 CRYBA2P53672 197 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 ZNF362Q5T0B9 420 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-204ENST00000469750 SLC35E4Q6ICL7 350 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 SCGB1D4Q6XE38 83 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 QTRT1Q9BXR0 403 aaKnown RBP13.47□□□□□ -0.25
BRAT1-204ENST00000469750 CCDC88CQ9P219 2028 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 S1PR2O95136 353 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 UCP3P55916 312 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 EAF1Q96JC9 268 aaPredicted RBP13.47□□□□□ -0.25
BRAT1-204ENST00000469750 HSPB8Q9UJY1 196 aa13.47□□□□□ -0.25
BRAT1-204ENST00000469750 PTPRFP10586 1907 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 NDUFB4O95168 129 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 MUC1P15941 1255 aaPredicted RBP13.46□□□□□ -0.25
BRAT1-204ENST00000469750 MFAP2P55001 183 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 CLDN18P56856 261 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 PLP1P60201 277 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 LINC01560Q8TB33 94 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 LSM10Q969L4 123 aaKnown RBP13.46□□□□□ -0.25
BRAT1-204ENST00000469750 TMEM189A5PLL7 270 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 GAGE10A6NGK3 116 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 CD74P04233 296 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 DNM1P46Q6ZS02 220 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 VN1R17PQ8TDU5 208 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 IMMP1LQ96LU5 166 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 AQP10Q96PS8 301 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 OR4C12Q96R67 309 aa13.46□□□□□ -0.25
BRAT1-204ENST00000469750 BRCA1P38398 1863 aaKnown RBP13.46□□□□□ -0.25
BRAT1-204ENST00000469750 ZIC3O60481 467 aa13.46□□□□□ -0.26
BRAT1-204ENST00000469750 APOBEC3AP31941 199 aaPredicted RBP13.46□□□□□ -0.26
BRAT1-204ENST00000469750 MEF2BQ02080 365 aaPredicted RBP13.46□□□□□ -0.26
BRAT1-204ENST00000469750 ZNF818PQ6ZRF7 136 aa13.46□□□□□ -0.26
BRAT1-204ENST00000469750 MYOZ3Q8TDC0 251 aa13.46□□□□□ -0.26
BRAT1-204ENST00000469750 AICDAQ9GZX7 198 aa13.46□□□□□ -0.26
BRAT1-204ENST00000469750 TRAV30A0A087WSZ9 112 aa13.46□□□□□ -0.26
BRAT1-204ENST00000469750 hCG_38984A0A1B0GV85 526 aa13.46□□□□□ -0.26
BRAT1-204ENST00000469750 C1QL1O75973 258 aa13.46□□□□□ -0.26
BRAT1-204ENST00000469750 TM4SF20Q53R12 229 aa13.46□□□□□ -0.26
BRAT1-204ENST00000469750 MRPL14Q6P1L8 145 aaKnown RBP13.46□□□□□ -0.26
BRAT1-204ENST00000469750 OR52M1Q8NGK5 317 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms