RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 H3BUA1 57 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 J3QLW9 94 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 J3QRE1 110 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 GNGT2O14610 69 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 MAGEB3O15480 346 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 AIREO43918 545 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 CDK2AP2O75956 126 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 OR2J3O76001 311 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 IFNA4P05014 189 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 HTR1AP08908 422 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 ANXA8P13928 327 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF19P17023 458 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 PRDX6P30041 224 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 SLC22A6Q4U2R8 563 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 FAM98BQ52LJ0 330 aaKnown RBP3.83□□□□□ -1.8
PTPN4-209ENST00000469511 NHLRC3Q5JS37 347 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 C6orf183Q5T699 404 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 RAB12Q6IQ22 244 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 Q6ZR54 194 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF767PQ75MW2 155 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 DHFR2Q86XF0 187 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 APRG1Q8IVJ8 170 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 SERPINA12Q8IW75 414 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 GHSRQ92847 366 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 RARRES2Q99969 163 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 AGMATQ9BSE5 352 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 CHRDL1Q9BU40 450 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 BANF2Q9H503 90 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 MAP6D1Q9H9H5 199 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF556Q9HAH1 456 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 TECRQ9NZ01 308 aaKnown RBP3.83□□□□□ -1.8
PTPN4-209ENST00000469511 WARS2Q9UGM6 360 aaKnown RBP3.83□□□□□ -1.8
PTPN4-209ENST00000469511 WASHC3Q9Y3C0 194 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 PEX16Q9Y5Y5 336 aa3.83□□□□□ -1.8
PTPN4-209ENST00000469511 A0A0B4J203 849 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 IGHV3-35A0A0C4DH35 117 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF320A2RRD8 509 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 OR5H14A6NHG9 310 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 FAM90A7PA6NKC0 464 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 C16orf90A8MZG2 172 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 MCRIP1C9JLW8 97 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 E7EUB6 86 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 LGALS9O00182 355 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 UBE2CO00762 179 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 SLC22A1O15245 554 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 SC5DO75845 299 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 NPSP0C0P6 89 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 RAB3AP20336 220 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 AADACP22760 399 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 HLA-DMBP28068 263 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 CCR9P51686 369 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 GTF2A1P52655 376 aaPredicted RBP3.82□□□□□ -1.8
PTPN4-209ENST00000469511 APOC4P55056 127 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 HTD2P86397 168 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 ATP5G2Q06055 141 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 MPV17LQ2QL34 196 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 C10orf55Q5SWW7 151 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 XAF1Q6GPH4 301 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 CLEC19AQ6UXS0 136 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 IDO2Q6ZQW0 420 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 Q6ZTC4 211 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 FAM220AQ7Z4H9 259 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 LHFPL3Q86UP9 236 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 STX19Q8N4C7 294 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 TMEM217Q8N7C4 229 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 POM121L12Q8N7R1 296 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 OR2AK2Q8NG84 335 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 OR5D14Q8NGL3 314 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 OR13C5Q8NGS8 318 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 OR11H2Q8NH07 326 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 IL1F10Q8WWZ1 152 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 C5orf30Q96GV9 206 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 USMG5Q96IX5 58 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 NSL1Q96IY1 281 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 C4orf36Q96KX1 117 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 METTL9Q9H1A3 318 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 IL36GQ9NZH8 169 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 OR1A1Q9P1Q5 309 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 MGAT4CQ9UBM8 478 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 JPT1Q9UK76 154 aa3.82□□□□□ -1.8
PTPN4-209ENST00000469511 KIR2DL5BA0A0G2JN68 375 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 KIR2DL5BA0A0G2JPC4 375 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 A0A1B0GW64 132 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 DAPL1A0PJW8 107 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 HMX3A6NHT5 357 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 RAB29O14966 203 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 GGCTO75223 188 aaKnown RBP3.81□□□□□ -1.8
PTPN4-209ENST00000469511 RPSAP08865 295 aaKnown RBP3.81□□□□□ -1.8
PTPN4-209ENST00000469511 OR9G9P0C7N8 305 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 MC5RP33032 325 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF93P35789 620 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-209ENST00000469511 ATP6V1E1P36543 226 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 LGALS7P47929 136 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 HMGN3Q15651 99 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 C15orf32Q32M92 178 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 LGALS9BQ3B8N2 356 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 ZNF585BQ52M93 769 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 LY6G6FQ5SQ64 297 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 C6orf141Q5SZD1 244 aa3.81□□□□□ -1.8
PTPN4-209ENST00000469511 DDI2Q5TDH0 399 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms