RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 CCL1P22362 96 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 EIF1P41567 113 aaKnown RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 GTF2A1P52655 376 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 HSPE1P61604 102 aaKnown RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 RHOBP62745 196 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 LINC00303Q3SY05 128 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 SBSNQ6UWP8 590 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 CYHR1Q6ZMK1 362 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 TCF23Q7RTU1 214 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 MARCH3Q86UD3 253 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 PDPNQ86YL7 162 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 ZBTB8OSQ8IWT0 167 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 C20orf196Q8IYI0 205 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 SUMF2Q8NBJ7 301 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 RHOXF1Q8NHV9 184 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 LHFPL5Q8TAF8 219 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 FAM57AQ8TBR7 257 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 ZNF414Q96IQ9 312 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 HDHD3Q9BSH5 251 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 RNASE7Q9H1E1 156 aaKnown RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 OR52D1Q9H346 318 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 RSL24D1Q9UHA3 163 aaKnown RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 NEU3Q9UQ49 428 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 HSPB11Q9Y547 144 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 PCYT1BQ9Y5K3 369 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 PXMP4Q9Y6I8 212 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 TMEM56-RWDD3S4R434 201 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 LMO7Q8WWI1 1683 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 PLXNB3Q9ULL4 1909 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 SCN11AQ9UI33 1791 aa3.22□□□□□ -1.89
SCFD1-205ENST00000469043 AHDC1Q5TGY3 1603 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 ZNF106Q9H2Y7 1883 aaKnown RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 PARP4Q9UKK3 1724 aaKnown RBP3.22□□□□□ -1.89
SCFD1-205ENST00000469043 ROBO1Q9Y6N7 1651 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 IGLV1-50A0A075B6I6 118 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 IGHV1OR15-9A0A0B4J2B8 117 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 TMEM150BA6NC51 233 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 ZFP92A6NM28 416 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 SRRM5B3KS81 715 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 INMT-MINDY4F8WBC2 141 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 MRASO14807 208 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 CHST10O43529 356 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 SRSF10O75494 262 aaKnown RBP3.21□□□□□ -1.9
SCFD1-205ENST00000469043 INSP01308 110 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 PPBPP02775 128 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 GIG44P09565 113 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-205ENST00000469043 HSPA9P38646 679 aaKnown RBP3.21□□□□□ -1.9
SCFD1-205ENST00000469043 INPP1P49441 399 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 CRISP3P54108 245 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 GABARAPL2P60520 117 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 LYZP61626 148 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 RBX1P62877 108 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 TMEM241Q24JQ0 296 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 TBPL2Q6SJ96 375 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 YIPF7Q8N8F6 280 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 SLC25A29Q8N8R3 303 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 LINC01555Q8NAE3 123 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 ZNF439Q8NDP4 499 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 ZNF555Q8NEP9 628 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 OR2M3Q8NG83 312 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 OR8S1Q8NH09 359 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 GRPEL2Q8TAA5 225 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 C15orf40Q8WUR7 153 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 RMND5BQ96G75 393 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-205ENST00000469043 CDX2Q99626 313 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-205ENST00000469043 GTSF1LQ9H1H1 148 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 FAM96AQ9H5X1 160 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 MMP26Q9NRE1 261 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 UQCC1Q9NVA1 299 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 TAC3Q9UHF0 121 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 ENOPH1Q9UHY7 261 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 LRRC37A3O60309 1634 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 PKD1L3Q7Z443 1732 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 NWD2Q9ULI1 1742 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 WNK3Q9BYP7 1800 aa3.21□□□□□ -1.9
SCFD1-205ENST00000469043 ADAMTS7Q9UKP4 1686 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 SIPA1L3O60292 1781 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-205ENST00000469043 COL14A1Q05707 1796 aaKnown RBP3.2□□□□□ -1.9
SCFD1-205ENST00000469043 N4BP2Q86UW6 1770 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-205ENST00000469043 ATRNO75882 1429 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 RALGAPA2Q2PPJ7 1873 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 DSCAML1Q8TD84 2053 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 PHLPP1O60346 1717 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 B4DEV8 164 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 PI15O43692 258 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 MFSD11O43934 449 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 MED6O75586 246 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 MT-CO2P00403 227 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 IGHV3-11P01762 117 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 IGHMP01871 453 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 SEC11BP0C7V7 166 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 PSG2P11465 335 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 HERVK_113P63121 156 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 IL15RAQ13261 267 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 KCNJ8Q15842 424 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 CCDC153Q494R4 210 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 TEX30Q5JUR7 227 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 MRPL2Q5T653 305 aaKnown RBP3.2□□□□□ -1.9
SCFD1-205ENST00000469043 NANOGP8Q6NSW7 305 aa3.2□□□□□ -1.9
SCFD1-205ENST00000469043 IL34Q6ZMJ4 242 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms