RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 GRPRP30550 384 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 BTN3A2P78410 334 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 EMX1Q04741 257 aaPredicted RBP0.7□□□□□ -2.3
SMC4-207ENST00000467263 SYCP1Q15431 976 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 MOGQ16653 247 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 LYZL1Q6UWQ5 148 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 C7orf65Q6ZTY9 151 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 ATP6V1C2Q8NEY4 427 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 Q8WTZ3 238 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 SLC7A6Q92536 515 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 EMC3Q9P0I2 261 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 REREQ9P2R6 1566 aa0.7□□□□□ -2.3
SMC4-207ENST00000467263 SIPA1L1O43166 1804 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 IGKV2D-26A0A0A0MRZ7 120 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 H2BFSP57053 126 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 TMEM33P57088 247 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 SMAGPQ0VAQ4 97 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 BLIDQ8IZY5 108 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 ZNF675Q8TD23 568 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 TMEM222Q9H0R3 208 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 METTL9Q9H1A3 318 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 PARVAQ9NVD7 372 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 TIMM9Q9Y5J7 89 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 PTPRSQ13332 1948 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 TMEM94Q12767 1356 aa0.69□□□□□ -2.3
SMC4-207ENST00000467263 MAP3K19Q56UN5 1328 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 A0A087WUU8 490 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 IGHV1-18A0A0C4DH31 117 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 DAPL1A0PJW8 107 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 METTL15A6NJ78 407 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 ATP5G1P05496 136 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 SERPINA7P05543 415 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 RPSAP08865 295 aaKnown RBP0.68□□□□□ -2.3
SMC4-207ENST00000467263 CA5AP35218 305 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 TBPL1P62380 186 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 HPCAP84074 193 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 USF2Q15853 346 aaPredicted RBP0.68□□□□□ -2.3
SMC4-207ENST00000467263 Q1T7F1 81 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 COPS6Q7L5N1 327 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 TMA16Q96EY4 203 aaKnown RBP0.68□□□□□ -2.3
SMC4-207ENST00000467263 ODF3Q96PU9 254 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 IMMP2LQ96T52 175 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 MROQ9BYG7 248 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 HDGFL3Q9Y3E1 203 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 RBM7Q9Y580 266 aaKnown RBP0.68□□□□□ -2.3
SMC4-207ENST00000467263 THSD7AQ9UPZ6 1657 aa0.68□□□□□ -2.3
SMC4-207ENST00000467263 DICER1Q9UPY3 1922 aaKnown RBP0.68□□□□□ -2.3
SMC4-207ENST00000467263 OR6C6A6NF89 314 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 ORC5O43913 435 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 F8A1P23610 371 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 CD79BP40259 229 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 FXYD7P58549 80 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 TPI1P60174 286 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 GNA13Q14344 377 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 MIAQ16674 131 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 RPS19BP1Q86WX3 136 aaKnown RBP0.67□□□□□ -2.3
SMC4-207ENST00000467263 STOML3Q8TAV4 291 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 MBD3L1Q8WWY6 194 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 C12orf43Q96C57 262 aaKnown RBP0.67□□□□□ -2.3
SMC4-207ENST00000467263 PPCDCQ96CD2 204 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 LRRC45Q96CN5 670 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 MS4A6EQ96DS6 147 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 ZNF514Q96K75 400 aaPredicted RBP0.67□□□□□ -2.3
SMC4-207ENST00000467263 MED10Q9BTT4 135 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 MED9Q9NWA0 146 aa0.67□□□□□ -2.3
SMC4-207ENST00000467263 GREB1Q4ZG55 1949 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 A0A0D9SEW6 157 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 H3BT86 120 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 H7C2G1 150 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 LINC00614P0C842 121 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 SNAP25P60880 206 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 ZNHIT3Q15649 155 aaPredicted RBP0.66□□□□□ -2.3
SMC4-207ENST00000467263 C4orf26Q17RF5 130 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 CLEC12BQ2HXU8 276 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 LRRC75BQ2VPJ9 315 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 ARHGAP11BQ3KRB8 267 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 FAM173BQ6P4H8 233 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 Q8N2B8 174 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 OR52E4Q8NGH9 312 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 C22orf24Q9Y442 160 aa0.66□□□□□ -2.3
SMC4-207ENST00000467263 CACNA1BQ00975 2339 aa0.65□□□□□ -2.3
SMC4-207ENST00000467263 NCOA6Q14686 2063 aaPredicted RBP0.65□□□□□ -2.31
SMC4-207ENST00000467263 GOLGA8RI6L899 631 aa0.65□□□□□ -2.31
SMC4-207ENST00000467263 AZIN1O14977 448 aa0.65□□□□□ -2.31
SMC4-207ENST00000467263 HLA-DQB2P05538 268 aa0.65□□□□□ -2.31
SMC4-207ENST00000467263 LGALS1P09382 135 aaKnown RBP0.65□□□□□ -2.31
SMC4-207ENST00000467263 RD3LP0DJH9 198 aa0.65□□□□□ -2.31
SMC4-207ENST00000467263 PSMB8P28062 276 aa0.65□□□□□ -2.31
SMC4-207ENST00000467263 KDELR2P33947 212 aa0.65□□□□□ -2.31
SMC4-207ENST00000467263 RPL28P46779 137 aaKnown RBP0.65□□□□□ -2.31
SMC4-207ENST00000467263 EMP1P54849 157 aa0.65□□□□□ -2.31
SMC4-207ENST00000467263 TAS2R20P59543 309 aa0.65□□□□□ -2.31
SMC4-207ENST00000467263 FAM45BPQ6NSW5 357 aa0.65□□□□□ -2.31
SMC4-207ENST00000467263 PCYT1BQ9Y5K3 369 aaPredicted RBP0.65□□□□□ -2.31
SMC4-207ENST00000467263 TRAV7A0A075B6U4 112 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 TRAV38-1A0A0B4J264 116 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 IGKV1-9A0A0C4DH69 117 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 A0A0J9YW62 118 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 C9JCJ5 164 aa0.64□□□□□ -2.31
SMC4-207ENST00000467263 CREBL2O60519 120 aaPredicted RBP0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms