RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 CCBE1Q6UXH8 406 aaPredicted RBP12.15□□□□□ -0.46
NPHP4-205ENST00000466897 TBC1D26Q86UD7 250 aa12.15□□□□□ -0.46
NPHP4-205ENST00000466897 POC5Q8NA72 575 aa12.15□□□□□ -0.46
NPHP4-205ENST00000466897 OR4S2Q8NH73 311 aa12.15□□□□□ -0.46
NPHP4-205ENST00000466897 OSR1Q8TAX0 266 aaPredicted RBP12.15□□□□□ -0.46
NPHP4-205ENST00000466897 ZFAND2BQ8WV99 257 aa12.15□□□□□ -0.46
NPHP4-205ENST00000466897 CHIAQ9BZP6 476 aa12.15□□□□□ -0.46
NPHP4-205ENST00000466897 H0Y980 276 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 H7C2Y5 167 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 M0QZK8 103 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 SPDEFO95238 335 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 IGKV1-16P04430 117 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 PI3P19957 117 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 CD24P25063 80 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 LGALS7P47929 136 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 BRWD1-AS2P59051 145 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 UBE2MP61081 183 aaKnown RBP12.14□□□□□ -0.47
NPHP4-205ENST00000466897 HES1Q14469 280 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 OR51H1Q8NH63 302 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 FLYWCH2Q96CP2 140 aaKnown RBP12.14□□□□□ -0.47
NPHP4-205ENST00000466897 C1RLQ9NZP8 487 aa12.14□□□□□ -0.47
NPHP4-205ENST00000466897 FAM240BA0A1B0GVZ2 78 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 CRYM-AS1A6NIL9 109 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 TRIM77I1YAP6 450 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 FGF16O43320 207 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 FCGR3BO75015 233 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 NDUFA3O95167 84 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 TAS2R31P59538 309 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 DCTN2Q13561 401 aaKnown RBP12.13□□□□□ -0.47
NPHP4-205ENST00000466897 FBLN7Q53RD9 439 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 SPAG16Q8N0X2 631 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 DUSP18Q8NEJ0 188 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 NPBQ8NG41 125 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 GALNT14Q96FL9 552 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 GPHA2Q96T91 129 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 TSNAXQ99598 290 aaKnown RBP12.13□□□□□ -0.47
NPHP4-205ENST00000466897 SLC25A33Q9BSK2 321 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 PLEKHA2Q9HB19 425 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 MOB4Q9Y3A3 225 aa12.13□□□□□ -0.47
NPHP4-205ENST00000466897 C3orf85A0A1B0GTC6 90 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 CHST1O43916 411 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 GPR137BO60478 399 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 CRYZL1O95825 349 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 HPRT1P00492 218 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 TCRBP04435 133 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 RPA2P15927 270 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 DHODHQ02127 395 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 LY6EQ16553 131 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 TMEM128Q5BJH2 165 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 C11orf88Q6PI97 169 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 CADM3Q8N126 398 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 CENPSQ8N2Z9 138 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 TMEM230Q96A57 120 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 AIFM2Q9BRQ8 373 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 NAA60Q9H7X0 242 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 PLSCR3Q9NRY6 295 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 COMMD9Q9P000 198 aa12.12□□□□□ -0.47
NPHP4-205ENST00000466897 NBR2O15453 112 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 RAMP3O60896 148 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 UCP1P25874 307 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 MECP2P51608 486 aaKnown RBP12.11□□□□□ -0.47
NPHP4-205ENST00000466897 MMDQ15546 238 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 POU2AF1Q16633 256 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 ZNF585BQ52M93 769 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 SLC25A42Q86VD7 318 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 TMEM219Q86XT9 240 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 SGPP2Q8IWX5 399 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 FAM71E2Q8N5Q1 922 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 C5orf56Q8N8D9 126 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 ADAD2Q8NCV1 583 aaKnown RBP12.11□□□□□ -0.47
NPHP4-205ENST00000466897 ENKURQ8TC29 256 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 HARBI1Q96MB7 349 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 DUX5Q96PT3 197 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 ALX4Q9H161 411 aaPredicted RBP12.11□□□□□ -0.47
NPHP4-205ENST00000466897 C20orf85Q9H1P6 137 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 RANBP3Q9H6Z4 567 aaPredicted RBP12.11□□□□□ -0.47
NPHP4-205ENST00000466897 NUBP2Q9Y5Y2 271 aa12.11□□□□□ -0.47
NPHP4-205ENST00000466897 PIGBOS1A0A0B4J2F0 54 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 TEX13DA0A0J9YY54 714 aaPredicted RBP12.1□□□□□ -0.47
NPHP4-205ENST00000466897 SHOXO15266 292 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 PTTG1O95997 202 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 HRASP01112 189 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 IGLV2-23P01705 113 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 VSIG10L2P0DP72 767 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 RPS16P62249 146 aaKnown RBP12.1□□□□□ -0.47
NPHP4-205ENST00000466897 HNF4GQ14541 408 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 OR2B11Q5JQS5 317 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 NRARPQ7Z6K4 114 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 TMED4Q7Z7H5 227 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 Q8N9W7 124 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 TP53RKQ96S44 253 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 NPFFR1Q9GZQ6 430 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 KIAA1456Q9P272 454 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 KCNIP3Q9Y2W7 256 aa12.1□□□□□ -0.47
NPHP4-205ENST00000466897 FAM181BA6NEQ2 426 aa12.09□□□□□ -0.47
NPHP4-205ENST00000466897 RRHO14718 337 aa12.09□□□□□ -0.47
NPHP4-205ENST00000466897 ARPC1BO15143 372 aaKnown RBP12.09□□□□□ -0.47
NPHP4-205ENST00000466897 AMY1AP04745 511 aa12.09□□□□□ -0.47
NPHP4-205ENST00000466897 SERPINE2P07093 398 aa12.09□□□□□ -0.47
NPHP4-205ENST00000466897 FGF2P09038 288 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms