RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 FOLR2P14207 255 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 SELENOVP59797 346 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 DOLPP1Q86YN1 238 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 TGIF2LYQ8IUE0 185 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 SH3BGRL2Q9UJC5 107 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 F2RL2O00254 374 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 AKR1D1P51857 326 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 RPS23P62266 143 aaKnown RBP16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 C1orf229Q6ZS94 237 aaPredicted RBP16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 CISD2Q8N5K1 135 aaKnown RBP16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 IFI27L2Q9H2X8 130 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 RNF7Q9UBF6 113 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 TP53TG5Q9Y2B4 290 aa16.88■□□□□ 0.29
TUBGCP3-204ENST00000464139 A0A0G2JNJ9 132 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 ZNF727A8MUV8 499 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 RPL35P42766 123 aaKnown RBP16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 OR10P1Q8NGE3 313 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 Q8TCH9 128 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 SEBOXQ9HB31 216 aaPredicted RBP16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 BIN3Q9NQY0 253 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 Q9UFV3 132 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 ROS1P08922 2347 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 PTAFRP25105 342 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 GATA4P43694 442 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 C17orf58Q2M2W7 97 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 ACSM6Q6P461 480 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 RPP25LQ8N5L8 163 aaKnown RBP16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 TMEM147Q9BVK8 224 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 DCAF16Q9NXF7 216 aa16.87■□□□□ 0.29
TUBGCP3-204ENST00000464139 MAP1LC3B2A6NCE7 125 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 BCL2P10415 239 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 FGF7P21781 194 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 RAB5BP61020 215 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 RAB11AP62491 216 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 TFF3Q07654 80 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 PINX1Q96BK5 328 aaKnown RBP16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 CIB3Q96Q77 187 aaPredicted RBP16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 MAP1LC3BQ9GZQ8 125 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 OR6C3Q9NZP0 311 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 HMGB3O15347 200 aaKnown RBP16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 OR2C1O95371 312 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 HPRT1P00492 218 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 IFNA17P01571 189 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 CGB3P0DN86 165 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 CGB7P0DN87 165 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 TAGLN2P37802 199 aaKnown RBP16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 DLK1P80370 383 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 ASCL5Q7RTU5 278 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 FAM222BQ8WU58 562 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 IL19Q9UHD0 177 aa16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 RAI1Q7Z5J4 1906 aaPredicted RBP16.86■□□□□ 0.29
TUBGCP3-204ENST00000464139 DSCAML1Q8TD84 2053 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 C1orf196B1AJZ1 125 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 RAB5AP20339 215 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 ATP6V1FQ16864 119 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 PRAMEF5Q5TYX0 476 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 CCL13Q99616 98 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 CISD1Q9NZ45 108 aaKnown RBP16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 PRRG2O14669 202 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 RNF212Q495C1 297 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 WFDC8Q8IUA0 241 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 ZNF561Q8N587 486 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 NIPSNAP3BQ9BS92 247 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 SLC39A9Q9NUM3 307 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 TIMM9Q9Y5J7 89 aa16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 KLF2Q9Y5W3 355 aaPredicted RBP16.85■□□□□ 0.29
TUBGCP3-204ENST00000464139 GYPAP02724 150 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 STUMQ69YW2 141 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 ADAM5Q6NVV9 412 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 LINC00518Q8N0U6 118 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 DYSFO75923 2080 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 TRAV3A0A0B4J244 114 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 TDGF1P3P51864 188 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 CT45A1Q5HYN5 189 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 FAM216BQ8N7L0 139 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 CT45A3Q8NHU0 189 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 LHX4Q969G2 390 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 TVP23CQ96ET8 276 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 SDSLQ96GA7 329 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 GAFA1Q96PS6 74 aa16.84■□□□□ 0.29
TUBGCP3-204ENST00000464139 ADGRG4Q8IZF6 3080 aa16.83■□□□□ 0.29
TUBGCP3-204ENST00000464139 C15orf62A8K5M9 175 aa16.83■□□□□ 0.28
TUBGCP3-204ENST00000464139 CCL8P80075 99 aa16.83■□□□□ 0.28
TUBGCP3-204ENST00000464139 FAM90A2PQ658T7 463 aa16.83■□□□□ 0.28
TUBGCP3-204ENST00000464139 CENPVQ7Z7K6 275 aaPredicted RBP16.83■□□□□ 0.28
TUBGCP3-204ENST00000464139 ZCCHC24Q8N2G6 241 aaKnown RBP16.83■□□□□ 0.28
TUBGCP3-204ENST00000464139 Q8NA96 180 aa16.83■□□□□ 0.28
TUBGCP3-204ENST00000464139 OR4A16Q8NH70 328 aa16.83■□□□□ 0.28
TUBGCP3-204ENST00000464139 S1PR3Q99500 378 aa16.83■□□□□ 0.28
TUBGCP3-204ENST00000464139 SLC25A22Q9H936 323 aa16.83■□□□□ 0.28
TUBGCP3-204ENST00000464139 SNRPEP62304 92 aaKnown RBP16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 TLE1Q04724 770 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 SNRNP40Q96DI7 357 aaKnown RBP16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 GFOD1Q9NXC2 390 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 TANC2Q9HCD6 1990 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 KBTBD11-OT1A0A1B0GTJ5 212 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 C16orf97H3BN30 126 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 TNFSF4P23510 183 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 TMEM108Q6UXF1 575 aa16.82■□□□□ 0.28
TUBGCP3-204ENST00000464139 TCF23Q7RTU1 214 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms