RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 SLC25A22Q9H936 323 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 PDFQ9HBH1 243 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 FGF21Q9NSA1 209 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 SLC39A9Q9NUM3 307 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 VPREB3Q9UKI3 123 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 NXT1Q9UKK6 140 aaKnown RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 B9D1Q9UPM9 204 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 HELZP42694 1942 aaKnown RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 A0A1W2PP11 408 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 SLC22A20A6NK97 555 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 FAM90A27PA6NNH2 459 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 HIDE1A8MVS5 230 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 NKX2-8O15522 239 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 PHF1O43189 567 aaPredicted RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 HSBP1O75506 76 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 MT-CO3P00414 261 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 MT-ATP8P03928 68 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 RHOCP08134 193 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 FABP2P12104 132 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 CPMP14384 443 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 INSL3P51460 131 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 HERV-K104P61576 105 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 UBE2G1P62253 170 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 SRSF6Q13247 344 aaKnown RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 FOXE3Q13461 319 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 RPEL1Q2QD12 228 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 PRICKLE4Q2TBC4 344 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 ITPRIPL2Q3MIP1 535 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 POM121L1PQ3SYA9 428 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 ETDBQ3ZM63 59 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 TM4SF20Q53R12 229 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 VAX1Q5SQQ9 334 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 MRPL2Q5T653 305 aaKnown RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 FAM166AQ6J272 317 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 RNASEKQ6P5S7 137 aaKnown RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 GLIPR1L1Q6UWM5 242 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 C19orf35Q6ZS72 473 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 TPRG1Q6ZUI0 275 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 LINC00346Q8IVM7 164 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 C3orf56Q8N813 242 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 C1orf162Q8NEQ5 155 aaPredicted RBP3.05□□□□□ -1.92
COL8A1-205ENST00000463753 NUP43Q8NFH3 380 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 OR5D13Q8NGL4 314 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 OR1F12Q8NHA8 337 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 KCNG3Q8TAE7 436 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 VSTM2AQ8TAG5 236 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 ARPC1AQ92747 370 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 ARHGAP5-AS1Q96IT6 56 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 RAB40CQ96S21 281 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 PMCHL2Q9BQD1 86 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 SPATA25Q9BR10 227 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 ULBP2Q9BZM5 246 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 CXXC4Q9H2H0 198 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 UBTD1Q9HAC8 227 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 OR1A1Q9P1Q5 309 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF391Q9UJN7 358 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 PLAGL1Q9UM63 463 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 DENND4CQ5VZ89 1909 aa3.05□□□□□ -1.92
COL8A1-205ENST00000463753 TNRC6AQ8NDV7 1962 aaKnown RBP3.04□□□□□ -1.92
COL8A1-205ENST00000463753 LOC102723996A0A087X1L8 192 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF732B4DXR9 585 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 H0YJW9 148 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 PAGE4O60829 102 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 SSR2P43308 183 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 NPBWR2P48146 333 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 YPEL3P61236 119 aaPredicted RBP3.04□□□□□ -1.92
COL8A1-205ENST00000463753 ROM1Q03395 351 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 WFDC2Q14508 124 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 KIR3DS1Q14943 382 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF585BQ52M93 769 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF766Q5HY98 468 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 EBLN2Q6P2I7 272 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 MOB1BQ7L9L4 216 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 CENPVQ7Z7K6 275 aaPredicted RBP3.04□□□□□ -1.92
COL8A1-205ENST00000463753 YRDCQ86U90 279 aaKnown RBP3.04□□□□□ -1.92
COL8A1-205ENST00000463753 TMEM251Q8N6I4 163 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 KIR3DL3Q8N743 410 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF114Q8NC26 417 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 OR8B3Q8NGG8 313 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 OR5A1Q8NGJ0 315 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 OR10D3Q8NH80 312 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 OR2T6Q8NHC8 308 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 TSKUQ8WUA8 353 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 ZNF480Q8WV37 535 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 DAZLQ92904 295 aaKnown RBP3.04□□□□□ -1.92
COL8A1-205ENST00000463753 SPSB4Q96A44 273 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 SLC35A4Q96G79 324 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 SPAG8Q99932 426 aaPredicted RBP3.04□□□□□ -1.92
COL8A1-205ENST00000463753 C20orf78Q9BR46 151 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 PIMREGQ9BSJ6 248 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 DOCK4Q8N1I0 1966 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 TRBV20-1A0A075B6N2 111 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 A0A1W2PPM0 123 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 A6NDN8 102 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 CRYM-AS1A6NIL9 109 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 BMPR1BO00238 502 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 LINC01565O15544 149 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 ANGPTL7O43827 346 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 SLC16A7O60669 478 aa3.04□□□□□ -1.92
COL8A1-205ENST00000463753 SLC35E2P0CK97 266 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms