RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 ACTL6BO94805 426 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 HLA-AP01891 365 aaKnown RBP10.81□□□□□ -0.68
SMC1A-204ENST00000463684 RRASP10301 218 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 MAPK3P27361 379 aaPredicted RBP10.81□□□□□ -0.68
SMC1A-204ENST00000463684 APOC4P55056 127 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 TAS2R43P59537 309 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 PRSS8Q16651 343 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 RTL8BQ17RB0 113 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 TMEM177Q53S58 311 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 GLT8D1Q68CQ7 371 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 TMEM61Q8N0U2 210 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 SRSF12Q8WXF0 261 aaKnown RBP10.81□□□□□ -0.68
SMC1A-204ENST00000463684 ACOT12Q8WYK0 555 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 TMEM80Q96HE8 168 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 HDHD3Q9BSH5 251 aaPredicted RBP10.81□□□□□ -0.68
SMC1A-204ENST00000463684 TM2D1Q9BX74 207 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 RDH8Q9NYR8 311 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 AK3Q9UIJ7 227 aa10.81□□□□□ -0.68
SMC1A-204ENST00000463684 ZNF320A2RRD8 509 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 WBP4O75554 376 aaKnown RBP10.8□□□□□ -0.68
SMC1A-204ENST00000463684 SCAF4O95104 1147 aaKnown RBP10.8□□□□□ -0.68
SMC1A-204ENST00000463684 UBE2KP61086 200 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 ZNF45Q02386 682 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 C15orf32Q32M92 178 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 FAM106AQ4KMX7 169 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 TM4SF20Q53R12 229 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 TTC23Q5W5X9 447 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 SLC25A42Q86VD7 318 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 GPHB5Q86YW7 130 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 PHLDA1Q8WV24 401 aaPredicted RBP10.8□□□□□ -0.68
SMC1A-204ENST00000463684 CACNG8Q8WXS5 425 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 SPIN2AQ99865 258 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 SPIN2BQ9BPZ2 258 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 C9orf16Q9BUW7 83 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 Q9N2K0 584 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 DNAH10Q8IVF4 4471 aa10.8□□□□□ -0.68
SMC1A-204ENST00000463684 UBE2CO00762 179 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 ATP5HO75947 161 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 OR2J3O76001 311 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 CELP19835 753 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 TPBGQ13641 420 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 MRGPRG-AS1Q2M3A8 158 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 DEFB135Q30KP9 77 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 TTC9CQ8N5M4 171 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 UXS1Q8NBZ7 420 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 GGHQ92820 318 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 OR2D2Q9H210 308 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 C12orf4Q9NQ89 552 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 SDHAF2Q9NX18 166 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 MLXQ9UH92 298 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 DMRT1Q9Y5R6 373 aa10.79□□□□□ -0.68
SMC1A-204ENST00000463684 TRDCB7Z8K6 153 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 SOCS1O15524 211 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 CREBL2O60519 120 aaPredicted RBP10.78□□□□□ -0.68
SMC1A-204ENST00000463684 SRMP19623 302 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 ARL3P36405 182 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 SERPINB10P48595 397 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 UNC119Q13432 240 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 C1orf100Q5SVJ3 147 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 OR4A47Q6IF82 309 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 IDO2Q6ZQW0 420 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 RBPMS2Q6ZRY4 209 aaKnown RBP10.78□□□□□ -0.68
SMC1A-204ENST00000463684 SLC38A6Q8IZM9 456 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 ZNF485Q8NCK3 441 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 ZNF555Q8NEP9 628 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 OR1L6Q8NGR2 347 aa10.78□□□□□ -0.68
SMC1A-204ENST00000463684 URM1Q9BTM9 101 aaKnown RBP10.78□□□□□ -0.68
SMC1A-204ENST00000463684 A0A0A6YYD4 124 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 TRAV25A0A0B4J276 109 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 IGKV1-6A0A0C4DH72 117 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 TMEM14DPA8MWL7 114 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 BPNT1O95861 308 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 CD1AP06126 327 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 ZFP1Q6P2D0 407 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 STPG3Q8N7X2 389 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 CMSS1Q9BQ75 279 aaKnown RBP10.77□□□□□ -0.69
SMC1A-204ENST00000463684 KCNK15Q9H427 330 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 FBXL7Q9UJT9 491 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 HSF4Q9ULV5 492 aa10.77□□□□□ -0.69
SMC1A-204ENST00000463684 RBM7Q9Y580 266 aaKnown RBP10.77□□□□□ -0.69
SMC1A-204ENST00000463684 HECTD4Q9Y4D8 3996 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 TMEM213A2RRL7 107 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 BET1O15155 118 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 CRYZL1O95825 349 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 RBM48Q5RL73 367 aaKnown RBP10.76□□□□□ -0.69
SMC1A-204ENST00000463684 BTNL8Q6UX41 500 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 CLEC19AQ6UXS0 136 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 OR2C3Q8N628 320 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 OR4A4PQ8NGN8 299 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 OR10J5Q8NHC4 309 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 OSR1Q8TAX0 266 aaPredicted RBP10.76□□□□□ -0.69
SMC1A-204ENST00000463684 RNF183Q96D59 192 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 ADTRPQ96IZ2 230 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 LPAR5Q9H1C0 372 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 ZNF430Q9H8G1 570 aaPredicted RBP10.76□□□□□ -0.69
SMC1A-204ENST00000463684 ZNF257Q9Y2Q1 563 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 KIAA1109Q2LD37 5005 aa10.76□□□□□ -0.69
SMC1A-204ENST00000463684 RYR1P21817 5038 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 KIR2DL5BA0A0G2JN68 375 aa10.75□□□□□ -0.69
SMC1A-204ENST00000463684 KIR2DL5BA0A0G2JPC4 375 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms