RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 AVPI1Q5T686 147 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 LPCAT3Q6P1A2 487 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 LYG2Q86SG7 212 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 H1FOOQ8IZA3 346 aaPredicted RBP5.98□□□□□ -1.45
UBE4B-204ENST00000462658 SLC38A6Q8IZM9 456 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 MUC20Q8N307 709 aaPredicted RBP5.98□□□□□ -1.45
UBE4B-204ENST00000462658 RFESDQ8TAC1 157 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 ZNF431Q8TF32 576 aaPredicted RBP5.98□□□□□ -1.45
UBE4B-204ENST00000462658 RAB1CQ92928 201 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 PPP1R14BQ96C90 147 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 C14orf79Q96F83 325 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 TIMD4Q96H15 378 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 FXYD6Q9H0Q3 95 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 OPN4Q9UHM6 478 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 OR2W1Q9Y3N9 320 aa5.98□□□□□ -1.45
UBE4B-204ENST00000462658 TRGV10A0A0A0MS01 117 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 IGKV1D-13A0A0B4J2D9 117 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 hADV38S2A0JD32 116 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 A8MV72 311 aaPredicted RBP5.97□□□□□ -1.45
UBE4B-204ENST00000462658 DVL1O14640 695 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 SFT2D2O95562 160 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 HLA-AP01891 365 aaKnown RBP5.97□□□□□ -1.45
UBE4B-204ENST00000462658 HOXB5P09067 269 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 CGB3P0DN86 165 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 CGB7P0DN87 165 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 IGKV1-13P0DP09 117 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 GNRHRP30968 328 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 SSTR5P35346 364 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 LUMP51884 338 aaPredicted RBP5.97□□□□□ -1.45
UBE4B-204ENST00000462658 HTD2P86397 168 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 DHODHQ02127 395 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 MEF2CQ06413 473 aaPredicted RBP5.97□□□□□ -1.45
UBE4B-204ENST00000462658 DHRS2Q13268 280 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 PPP1R1AQ13522 171 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 ABCA11PQ4W5N1 156 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 FGFRL1Q8N441 504 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 C12orf45Q8N5I9 185 aaPredicted RBP5.97□□□□□ -1.45
UBE4B-204ENST00000462658 UXS1Q8NBZ7 420 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 OR10V1Q8NGI7 309 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 SECTM1Q8WVN6 248 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 H1FXQ92522 213 aaKnown RBP5.97□□□□□ -1.45
UBE4B-204ENST00000462658 CORO2AQ92828 525 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 TMEM230Q96A57 120 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 ZNF486Q96H40 463 aaPredicted RBP5.97□□□□□ -1.45
UBE4B-204ENST00000462658 CCL19Q99731 98 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 FAM110AQ9BQ89 295 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 SLC5A7Q9GZV3 580 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 RAB9BQ9NP90 201 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 OR2S2Q9NQN1 319 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 RDH8Q9NYR8 311 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 CALYQ9NYX4 217 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 CTSZQ9UBR2 303 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 RBM7Q9Y580 266 aaKnown RBP5.97□□□□□ -1.45
UBE4B-204ENST00000462658 OTOGQ6ZRI0 2925 aa5.97□□□□□ -1.45
UBE4B-204ENST00000462658 IGHV3-43A0A0B4J1X8 118 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 TEX13DA0A0J9YY54 714 aaPredicted RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 KBTBD11-OT1A0A1B0GTJ5 212 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 CRYM-AS1A6NIL9 109 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 ZNF729A6NN14 1252 aaPredicted RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 GPR31O00270 319 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 HSD17B6O14756 317 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 PAGE4O60829 102 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 FCN3O75636 299 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 DUS4LO95620 317 aaKnown RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 OR8U9P0C7N5 309 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 SULT1A3P0DMM9 295 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 SULT1A4P0DMN0 295 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 IGHV3-43DP0DP04 118 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 RPS2P15880 293 aaKnown RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 CD34P28906 385 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 PPP1CCP36873 323 aaKnown RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 GPR6P46095 362 aaPredicted RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 F2RL1P55085 397 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 PIGPP57054 158 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 RPL31P62899 125 aaKnown RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 SUPT4H1P63272 117 aaKnown RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 CD300CQ08708 224 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 GNMTQ14749 295 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 LTC4SQ16873 150 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 C17orf58Q2M2W7 97 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 TMEM155Q4W5P6 130 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 PHLDA2Q53GA4 152 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 CXorf66Q5JRM2 361 aaPredicted RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 FAM53AQ6NSI3 398 aaPredicted RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 C11orf88Q6PI97 169 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 ZNF818PQ6ZRF7 136 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 FOXRED2Q8IWF2 684 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 SGPP2Q8IWX5 399 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 CCDC71LQ8N9Z2 235 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 TMEM116Q8NCL8 245 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 OR2AK2Q8NG84 335 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 OR11H7Q8NGC8 314 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 OR8U1Q8NH10 309 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 CASTOR1Q8WTX7 329 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 RTN4IP1Q8WWV3 396 aaPredicted RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 ST6GAL2Q96JF0 529 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 TOLLIPQ9H0E2 274 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 PARP12Q9H0J9 701 aaKnown RBP5.96□□□□□ -1.46
UBE4B-204ENST00000462658 CCL28Q9NRJ3 127 aa5.96□□□□□ -1.46
UBE4B-204ENST00000462658 C19orf12Q9NSK7 152 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms