RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 LINC00312Q9Y6C7 94 aa16.67■□□□□ 0.26
CCM2-203ENST00000461377 SAA2-SAA4A0A096LPE2 208 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 A0A1W2PPE3 182 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 H2AFB1P0C5Y9 115 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 SAA2P0DJI9 122 aaPredicted RBP16.66■□□□□ 0.26
CCM2-203ENST00000461377 NFYBP25208 207 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 TAGLNQ01995 201 aaKnown RBP16.66■□□□□ 0.26
CCM2-203ENST00000461377 ZDHHC16Q969W1 377 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 TMEM106BQ9NUM4 274 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 SLC25A10Q9UBX3 287 aaPredicted RBP16.66■□□□□ 0.26
CCM2-203ENST00000461377 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP16.66■□□□□ 0.26
CCM2-203ENST00000461377 BTBD17A6NE02 478 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 PMS2P5A8MQ11 134 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 RBMXL2O75526 392 aaKnown RBP16.66■□□□□ 0.26
CCM2-203ENST00000461377 MMP23AO75900 390 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 CD3EP07766 207 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 NDUFB7P17568 137 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 EFNB3Q15768 340 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 RSG1Q9BU20 258 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 QTRT1Q9BXR0 403 aaKnown RBP16.66■□□□□ 0.26
CCM2-203ENST00000461377 WDR61Q9GZS3 305 aaKnown RBP16.66■□□□□ 0.26
CCM2-203ENST00000461377 EIF5A2Q9GZV4 153 aaKnown RBP16.66■□□□□ 0.26
CCM2-203ENST00000461377 DYNLRB1Q9NP97 96 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 RPUSD1Q9UJJ7 312 aaKnown RBP16.66■□□□□ 0.26
CCM2-203ENST00000461377 KPTNQ9Y664 436 aa16.66■□□□□ 0.26
CCM2-203ENST00000461377 TLN1Q9Y490 2541 aaKnown RBP16.65■□□□□ 0.26
CCM2-203ENST00000461377 DSCAML1Q8TD84 2053 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 A0A1B0GV50 99 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 FAM90A27PA6NNH2 459 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 TNFRSF13BO14836 293 aaPredicted RBP16.65■□□□□ 0.26
CCM2-203ENST00000461377 GPR37O15354 613 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 CHRNB4P30926 498 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 NPBWR1P48145 328 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 PPT1P50897 306 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 CCL20P78556 96 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 MEF2CQ06413 473 aaPredicted RBP16.65■□□□□ 0.26
CCM2-203ENST00000461377 PRAMEF5Q5TYX0 476 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 OR8G2PQ6IF36 304 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 MS4A5Q9H3V2 200 aa16.65■□□□□ 0.26
CCM2-203ENST00000461377 ICE1Q9Y2F5 2266 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 CEBPZOSA8MTT3 80 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 CCL21O00585 134 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 FCN3O75636 299 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 APOBEC3AP31941 199 aaPredicted RBP16.64■□□□□ 0.25
CCM2-203ENST00000461377 THBS3P49746 956 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 MRPS11P82912 194 aaKnown RBP16.64■□□□□ 0.25
CCM2-203ENST00000461377 ATP6V1FQ16864 119 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 OR4S2Q8NH73 311 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 C17orf50Q8WW18 174 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 CCL17Q92583 94 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 TANC2Q9HCD6 1990 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 NQO2P16083 231 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 ERVK-16P61578 105 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 TLE4Q04727 773 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 LYG1Q8N1E2 194 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 OR10A7Q8NGE5 316 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 LINC01560Q8TB33 94 aa16.64■□□□□ 0.25
CCM2-203ENST00000461377 OR2B8PP59922 312 aa16.63■□□□□ 0.25
CCM2-203ENST00000461377 SLC25A48Q6ZT89 311 aaKnown RBP16.63■□□□□ 0.25
CCM2-203ENST00000461377 SSX9Q7RTT3 188 aa16.63■□□□□ 0.25
CCM2-203ENST00000461377 TAF15Q92804 592 aaKnown RBP eCLIP16.63■□□□□ 0.25
CCM2-203ENST00000461377 ADTRPQ96IZ2 230 aa16.63■□□□□ 0.25
CCM2-203ENST00000461377 KIAA1456Q9P272 454 aa16.63■□□□□ 0.25
CCM2-203ENST00000461377 NDRG3Q9UGV2 375 aa16.63■□□□□ 0.25
CCM2-203ENST00000461377 UBE2L5PA0A1B0GUS4 154 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 LOC105371267A0A1B0GV96 52 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 B9A039 149 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 GNG10P50151 68 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 SPINK9Q5DT21 86 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 DHRS7BQ6IAN0 325 aaPredicted RBP16.62■□□□□ 0.25
CCM2-203ENST00000461377 OR52E5Q8NH55 327 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 TMEM147Q9BVK8 224 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 GAL3ST2Q9H3Q3 398 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 SMDT1Q9H4I9 107 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 LY86O95711 162 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 RPL31P62899 125 aaKnown RBP16.62■□□□□ 0.25
CCM2-203ENST00000461377 SERF2P84101 59 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 RELBQ01201 579 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 PDLIM3Q53GG5 364 aaPredicted RBP16.62■□□□□ 0.25
CCM2-203ENST00000461377 VKORC1L1Q8N0U8 176 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 ZNF383Q8NA42 475 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 OR4A16Q8NH70 328 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 PINX1Q96BK5 328 aaKnown RBP16.62■□□□□ 0.25
CCM2-203ENST00000461377 TMEM140Q9NV12 185 aa16.62■□□□□ 0.25
CCM2-203ENST00000461377 TRAV1-1A0A0B4J248 108 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 PLAUP00749 431 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 HBE1P02100 147 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 SPCS3P61009 180 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 CLRN3Q8NCR9 226 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 OR10P1Q8NGE3 313 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 SFT2D1Q8WV19 159 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 RPRMQ9NS64 109 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 TIMM9Q9Y5J7 89 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 PCNX1Q96RV3 2341 aa16.61■□□□□ 0.25
CCM2-203ENST00000461377 RBFOX3A6NFN3 312 aa16.6■□□□□ 0.25
CCM2-203ENST00000461377 IFNA17P01571 189 aa16.6■□□□□ 0.25
CCM2-203ENST00000461377 GRNP28799 593 aaKnown RBP16.6■□□□□ 0.25
CCM2-203ENST00000461377 GNB2P62879 340 aa16.6■□□□□ 0.25
CCM2-203ENST00000461377 ADORA2A-AS1P86434 159 aa16.6■□□□□ 0.25
CCM2-203ENST00000461377 LYPD2Q6UXB3 125 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms