RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 SLC45A2Q9UMX9 530 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 DCHS1Q96JQ0 3298 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 TRAV24A0A0B4J272 114 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 SPAARA0A1B0GVQ0 90 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 C17orf112F2Z3M2 114 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 G3V3Y1 287 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 DEGS1O15121 323 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 SYNGR1O43759 233 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 NDUFB8O95169 186 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 SUMO1P63165 101 aaKnown RBP13.03□□□□□ -0.32
SSR4-206ENST00000460616 CPEB3Q8NE35 698 aaKnown RBP13.03□□□□□ -0.32
SSR4-206ENST00000460616 RNF2Q99496 336 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 PRDM14Q9GZV8 571 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 OCIAD1Q9NX40 245 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 FBXL7Q9UJT9 491 aa13.03□□□□□ -0.32
SSR4-206ENST00000460616 TRBV20OR9-2A0A075B6H5 130 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 TRAV39A0A0B4J263 110 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 PMS2P5A8MQ11 134 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 DIRC3C9JPN6 131 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 F2Z2F3 143 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 CCL25O15444 150 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 LIFP15018 202 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 HNF1AP20823 631 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 CCNOP22674 350 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 TIMP3P35625 211 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 RAC1P63000 192 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 Q0VG73 95 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 TRIP6Q15654 476 aaKnown RBP13.02□□□□□ -0.32
SSR4-206ENST00000460616 LEMD1Q68G75 181 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 DHRS13Q6UX07 377 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 C22orf15Q8WYQ4 148 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 ZNF488Q96MN9 340 aa13.02□□□□□ -0.32
SSR4-206ENST00000460616 FCN1O00602 326 aa13.02□□□□□ -0.33
SSR4-206ENST00000460616 SYNGR4O95473 234 aa13.02□□□□□ -0.33
SSR4-206ENST00000460616 OR5G3P0C626 314 aa13.02□□□□□ -0.33
SSR4-206ENST00000460616 THBS3P49746 956 aa13.02□□□□□ -0.33
SSR4-206ENST00000460616 SPATA45Q537H7 98 aa13.02□□□□□ -0.33
SSR4-206ENST00000460616 ORAOV1Q8WV07 137 aa13.02□□□□□ -0.33
SSR4-206ENST00000460616 GAL3ST2Q9H3Q3 398 aa13.02□□□□□ -0.33
SSR4-206ENST00000460616 UQCR10Q9UDW1 63 aa13.02□□□□□ -0.33
SSR4-206ENST00000460616 NPIPB11E5RHQ5 1161 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 GPX1P07203 203 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 C1orf174Q8IYL3 243 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 OCC1Q8TAD7 63 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 QTRT1Q9BXR0 403 aaKnown RBP13.01□□□□□ -0.33
SSR4-206ENST00000460616 ZNF586Q9NXT0 402 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 TRAV38-1A0A0B4J264 116 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 ZNHIT1O43257 154 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 CTRLP40313 264 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 RAC3P60763 192 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 LINC00596Q86U02 117 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 OR1L6Q8NGR2 347 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 TXN2Q99757 166 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 ZNF703Q9H7S9 590 aaPredicted RBP13.01□□□□□ -0.33
SSR4-206ENST00000460616 LAMTOR2Q9Y2Q5 125 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 RNF114Q9Y508 228 aa13.01□□□□□ -0.33
SSR4-206ENST00000460616 A0A1W2PPV4 95 aa13□□□□□ -0.33
SSR4-206ENST00000460616 NKX6-3A6NJ46 265 aa13□□□□□ -0.33
SSR4-206ENST00000460616 LRRC30A6NM36 301 aa13□□□□□ -0.33
SSR4-206ENST00000460616 SCRG1O75711 98 aa13□□□□□ -0.33
SSR4-206ENST00000460616 CCL3P10147 92 aa13□□□□□ -0.33
SSR4-206ENST00000460616 CCL4P13236 92 aa13□□□□□ -0.33
SSR4-206ENST00000460616 Q6ZN92 141 aa13□□□□□ -0.33
SSR4-206ENST00000460616 COLCA1Q6ZS62 124 aa13□□□□□ -0.33
SSR4-206ENST00000460616 DRAM1Q8N682 238 aa13□□□□□ -0.33
SSR4-206ENST00000460616 Q8N976 141 aa13□□□□□ -0.33
SSR4-206ENST00000460616 UBALD1Q8TB05 177 aa13□□□□□ -0.33
SSR4-206ENST00000460616 GMPPAQ96IJ6 420 aaPredicted RBP13□□□□□ -0.33
SSR4-206ENST00000460616 CTNNBIP1Q9NSA3 81 aaPredicted RBP13□□□□□ -0.33
SSR4-206ENST00000460616 DLL3Q9NYJ7 618 aa13□□□□□ -0.33
SSR4-206ENST00000460616 IL36BQ9NZH7 164 aa13□□□□□ -0.33
SSR4-206ENST00000460616 C19orf25Q9UFG5 118 aaPredicted RBP13□□□□□ -0.33
SSR4-206ENST00000460616 KNTC1P50748 2209 aa13□□□□□ -0.33
SSR4-206ENST00000460616 TRAV9-1A0A075B6T8 112 aa13□□□□□ -0.33
SSR4-206ENST00000460616 GJE1A6NN92 205 aa13□□□□□ -0.33
SSR4-206ENST00000460616 C3orf80F5H4A9 247 aa13□□□□□ -0.33
SSR4-206ENST00000460616 G6PCP35575 357 aa13□□□□□ -0.33
SSR4-206ENST00000460616 IER3P46695 156 aa13□□□□□ -0.33
SSR4-206ENST00000460616 KLF3P57682 345 aaPredicted RBP13□□□□□ -0.33
SSR4-206ENST00000460616 CARD18P57730 90 aa13□□□□□ -0.33
SSR4-206ENST00000460616 VWC2Q2TAL6 325 aa13□□□□□ -0.33
SSR4-206ENST00000460616 GCSAMLQ5JQS6 135 aa13□□□□□ -0.33
SSR4-206ENST00000460616 STARD4Q96DR4 205 aa13□□□□□ -0.33
SSR4-206ENST00000460616 CHODLQ9H9P2 273 aa13□□□□□ -0.33
SSR4-206ENST00000460616 RNF212BA8MTL3 300 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 SLC17A3O00476 420 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 ZG16O60844 167 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 TMEM249Q2WGJ8 235 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 KRTCAP3Q53RY4 240 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 MRPL21Q7Z2W9 205 aaKnown RBP12.99□□□□□ -0.33
SSR4-206ENST00000460616 APOBEC3DQ96AK3 386 aaPredicted RBP12.99□□□□□ -0.33
SSR4-206ENST00000460616 ZNF552Q9H707 407 aaPredicted RBP12.99□□□□□ -0.33
SSR4-206ENST00000460616 ZNF716A6NP11 495 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 AQP7O14520 342 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 SH2D1BO14796 132 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 GFRA3O60609 400 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 RAMP3O60896 148 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 HYPMO75409 117 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 IGLC2P0DOY2 106 aa12.99□□□□□ -0.33
SSR4-206ENST00000460616 IGLC3P0DOY3 106 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms