RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 ZNF154Q13106 437 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 ZNF345Q14585 488 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 PDCD1Q15116 288 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 PRSS54Q6PEW0 395 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 WDR86Q86TI4 376 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 NHLRC2Q8NBF2 726 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 SCCPDHQ8NBX0 429 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 ZBTB34Q8NCN2 500 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 OR13G1Q8NGZ3 307 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 CYYR1Q96J86 154 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 FXYD6Q9H0Q3 95 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 ZNF581Q9P0T4 197 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 POLDIP2Q9Y2S7 368 aa8.74□□□□□ -1.01
HERC4-207ENST00000460168 POLR3KQ9Y2Y1 108 aaPredicted RBP8.74□□□□□ -1.01
HERC4-207ENST00000460168 FAM157AC9JC47 383 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 RNASEK-C17orf49H0YIS7 233 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 OR7C2O60412 319 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 AMY2AP04746 511 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 CSN2P05814 226 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 SRSF4Q08170 494 aaKnown RBP8.73□□□□□ -1.01
HERC4-207ENST00000460168 PDLIM3Q53GG5 364 aaPredicted RBP8.73□□□□□ -1.01
HERC4-207ENST00000460168 LRP11Q86VZ4 500 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 KCNRGQ8N5I3 272 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 RAX2Q96IS3 184 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 EAF1Q96JC9 268 aaPredicted RBP8.73□□□□□ -1.01
HERC4-207ENST00000460168 ZNF488Q96MN9 340 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 CA10Q9NS85 328 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 HSF4Q9ULV5 492 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 F5H5P2 479 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 GOSR2O14653 212 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 BCL2L11O43521 198 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 PDCD6O75340 191 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 THBDP07204 575 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 CHATP28329 748 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 SSTR5P35346 364 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 HRH1P35367 487 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 BSPH1Q075Z2 132 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 BATFQ16520 125 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 Q6ZR03 302 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 TMEM171Q8WVE6 324 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 EMG1Q92979 244 aaKnown RBP8.73□□□□□ -1.01
HERC4-207ENST00000460168 ST6GALNAC5Q9BVH7 336 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 ZNF442Q9H7R0 627 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 OR2S2Q9NQN1 319 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 IL36RNQ9UBH0 155 aa8.73□□□□□ -1.01
HERC4-207ENST00000460168 NKX2-6A6NCS4 301 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 SNRPGP15A8MWD9 76 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 E5RGE8 158 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 SMAD7O15105 426 aaKnown RBP8.72□□□□□ -1.01
HERC4-207ENST00000460168 ARPC1BO15143 372 aaKnown RBP8.72□□□□□ -1.01
HERC4-207ENST00000460168 IGHV3-13P01766 116 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 CD74P04233 296 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 AKR1C4P17516 323 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FUT3P21217 361 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 ADORA2A-AS1P86434 159 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 BAXQ07812 192 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 MSMPQ1L6U9 139 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 SPIN3Q5JUX0 258 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 HS3ST6Q96QI5 342 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 CXXC4Q9H2H0 198 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 PLK3Q9H4B4 646 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 TMEM231Q9H6L2 316 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 OR5AC2Q9NZP5 309 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 VAX2Q9UIW0 290 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 DIDO1Q9BTC0 2240 aaKnown RBP8.72□□□□□ -1.01
HERC4-207ENST00000460168 KANTRA0A1W2PQU2 76 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 UBE2QL1A1L167 161 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A10PA6NDY2 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A18PA6NE21 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A16PA6NEW6 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A20PA6NIJ5 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A8PA6NJQ4 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A7PA6NKC0 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A22PA8MWA6 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A12PA8MX19 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A5PA8MXJ8 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A23PA8MXZ1 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 PPP5D1E7EU14 171 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 C3orf80F5H4A9 247 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 RBFOX2O43251 390 aaKnown RBP eCLIP8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A15PP0C7V4 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A13PP0C7W8 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A14PP0C7W9 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 FAM90A24PP0C7X0 464 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 AMY2BP19961 511 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 DUSP1P28562 367 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 COA6Q5JTJ3 125 aaKnown RBP8.72□□□□□ -1.01
HERC4-207ENST00000460168 Q8IYB0 196 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 OR2AK2Q8NG84 335 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 PIMREGQ9BSJ6 248 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 MRPL27Q9P0M9 148 aaKnown RBP8.72□□□□□ -1.01
HERC4-207ENST00000460168 AK3Q9UIJ7 227 aa8.72□□□□□ -1.01
HERC4-207ENST00000460168 PLCE1Q9P212 2302 aa8.71□□□□□ -1.01
HERC4-207ENST00000460168 DPRXA6NFQ7 191 aa8.71□□□□□ -1.02
HERC4-207ENST00000460168 K7EQM0 130 aa8.71□□□□□ -1.02
HERC4-207ENST00000460168 NDUFB6O95139 128 aa8.71□□□□□ -1.02
HERC4-207ENST00000460168 CNIH1O95406 144 aa8.71□□□□□ -1.02
HERC4-207ENST00000460168 MZT1Q08AG7 82 aa8.71□□□□□ -1.02
HERC4-207ENST00000460168 MPV17LQ2QL34 196 aa8.71□□□□□ -1.02
HERC4-207ENST00000460168 MOGAT3Q86VF5 341 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms