RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 DCUN1D5Q9BTE7 237 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 PSMB11A5LHX3 300 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 PMP2P02689 132 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 CD24P25063 80 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 PAX6P26367 422 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 ETV6P41212 452 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 RND3P61587 244 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 THOC7Q6I9Y2 204 aaKnown RBP8.5□□□□□ -1.05
UBR4-208ENST00000459947 OR51J1Q9H342 316 aa8.5□□□□□ -1.05
UBR4-208ENST00000459947 IGF1P05019 195 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 ELANEP08246 267 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 VSIG10L2P0DP72 767 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 PSG5Q15238 335 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 MFSD4AQ8N468 514 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 SOSTQ9BQB4 213 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 SCP2D1Q9UJQ7 156 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 MEIS3P1A6NDR6 274 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 HLA-DMAP28067 261 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 CD40LGP29965 261 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 CNPY1Q3B7I2 92 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 STEAP1BQ6NZ63 245 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 C5orf24Q7Z6I8 188 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 MMD2Q8IY49 270 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 METTL1Q9UBP6 276 aaKnown RBP8.49□□□□□ -1.05
UBR4-208ENST00000459947 AMY1AP04745 511 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 AMY2AP04746 511 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 FXYD4P59646 89 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 ERVK-16P61578 105 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 BLCAPP62952 87 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 GDPD1Q8N9F7 314 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 CYYR1Q96J86 154 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 ABHD1Q96SE0 405 aa8.49□□□□□ -1.05
UBR4-208ENST00000459947 HPRT1P00492 218 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 TAS2R31P59538 309 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 FOXE3Q13461 319 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 CXorf66Q5JRM2 361 aaPredicted RBP8.48□□□□□ -1.05
UBR4-208ENST00000459947 STPG2Q8N412 459 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 ZNF469Q96JG9 3925 aaPredicted RBP8.48□□□□□ -1.05
UBR4-208ENST00000459947 SETD2Q9BYW2 2564 aaPredicted RBP8.48□□□□□ -1.05
UBR4-208ENST00000459947 H3BUA1 57 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 ARPC1BO15143 372 aaKnown RBP8.48□□□□□ -1.05
UBR4-208ENST00000459947 PTHLHP12272 177 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 PGAM2P15259 253 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 INPP1P49441 399 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 PYDC2Q56P42 97 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 AADACL3Q5VUY0 350 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 ZNF562Q6V9R5 426 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 GLDNQ6ZMI3 551 aaPredicted RBP8.48□□□□□ -1.05
UBR4-208ENST00000459947 CCDC190Q86UF4 302 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 LYSMD2Q8IV50 215 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 MRPL41Q8IXM3 137 aaKnown RBP8.48□□□□□ -1.05
UBR4-208ENST00000459947 OR6Q1Q8NGQ2 317 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 RSRP1Q9BUV0 290 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 FXYD6Q9H0Q3 95 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 PLEKHA2Q9HB19 425 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 CCL28Q9NRJ3 127 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 C14orf166Q9Y224 244 aaKnown RBP8.48□□□□□ -1.05
UBR4-208ENST00000459947 IGKV1D-13A0A0B4J2D9 117 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 IGKV1-13P0DP09 117 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 RPA2P15927 270 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 ZNF45Q02386 682 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 FAM209BQ5JX69 171 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 TEX38Q6PEX7 206 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 OR4F17Q8NGA8 305 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 OR5M8Q8NGP6 311 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 OR4F4Q96R69 305 aa8.48□□□□□ -1.05
UBR4-208ENST00000459947 C7orf50Q9BRJ6 194 aaKnown RBP8.48□□□□□ -1.05
UBR4-208ENST00000459947 TSSC4Q9Y5U2 329 aaPredicted RBP8.48□□□□□ -1.05
UBR4-208ENST00000459947 NAP1L6A6NFF2 107 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 ACTL6BO94805 426 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 CRYZL1O95825 349 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 EIF4EBP1Q13541 118 aaPredicted RBP8.47□□□□□ -1.05
UBR4-208ENST00000459947 SLC25A42Q86VD7 318 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 WIPF2Q8TF74 440 aaPredicted RBP8.47□□□□□ -1.05
UBR4-208ENST00000459947 SLC2A8Q9NY64 477 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 DPPA5A6NC42 116 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 FCGR3BO75015 233 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 PROP1O75360 226 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 DGCR2P98153 550 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 OR5AU1Q8NGC0 362 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 TERB2Q8NHR7 220 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 S100ZQ8WXG8 99 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 CACFD1Q9UGQ2 172 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 ANKRD20A5PA0PJZ0 165 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 NQO2P16083 231 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 PPP1R27Q86WC6 154 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 LHFPL1Q86WI0 220 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 TSC22D3Q99576 134 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 GPR61Q9BZJ8 451 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 SIGLEC9Q9Y336 463 aa8.47□□□□□ -1.05
UBR4-208ENST00000459947 F2RP25116 425 aa8.46□□□□□ -1.05
UBR4-208ENST00000459947 RFX2P48378 723 aa8.46□□□□□ -1.05
UBR4-208ENST00000459947 PRR31Q5SQ13 230 aa8.46□□□□□ -1.05
UBR4-208ENST00000459947 SPAG16Q8N0X2 631 aa8.46□□□□□ -1.05
UBR4-208ENST00000459947 SRSF8Q9BRL6 282 aaKnown RBP8.46□□□□□ -1.05
UBR4-208ENST00000459947 FBXL15Q9H469 300 aa8.46□□□□□ -1.05
UBR4-208ENST00000459947 CYB5BO43169 146 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 BRI3O95415 125 aa8.46□□□□□ -1.06
UBR4-208ENST00000459947 CTSDP07339 412 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms