RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 SUMF2Q8NBJ7 301 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 OR52L2PQ8NGH6 319 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 TCEAL3Q969E4 200 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 C11orf1Q9H5F2 150 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 KIAA1549Q9HCM3 1950 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 CEP250Q9BV73 2442 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 IGKV1-6A0A0C4DH72 117 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 H0Y980 276 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 SYNGR1O43759 233 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 CHST1O43916 411 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 GHRHP01286 108 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF806P0C7X5 589 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 DUSP3P51452 185 aaPredicted RBP9.93□□□□□ -0.82
SYNE2-207ENST00000458046 NUTF2P61970 127 aaKnown RBP9.93□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF266Q14584 549 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 IGFBP7Q16270 282 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 ODF3L1Q8IXM7 274 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 OR1J1Q8NGS3 322 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 HES7Q9BYE0 225 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 AP5S1Q9NUS5 200 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 TP53TG5Q9Y2B4 290 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF407Q9C0G0 2248 aa9.93□□□□□ -0.82
SYNE2-207ENST00000458046 A0A1B0GV72 72 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 PMELP40967 661 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 FGF12P61328 243 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 SRPXP78539 464 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF154Q13106 437 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 RAB31Q13636 194 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 LPAL2Q16609 132 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 IZUMO4Q1ZYL8 232 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 C20orf204Q6ZNR8 217 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 VKORC1Q9BQB6 163 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 LYRM2Q9NU23 88 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-207ENST00000458046 AHCTF1Q8WYP5 2266 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 RBFOX3A6NFN3 312 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 TRAPPC2LH3BP13 241 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 H3BP45 60 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 CNIH1O95406 144 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 NAPSAO96009 420 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 DCAF12Q5T6F0 453 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 SERTAD4-AS1Q5TG53 156 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 SPSB3Q6PJ21 355 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 MBD3L2Q8NHZ7 208 aaPredicted RBP9.92□□□□□ -0.82
SYNE2-207ENST00000458046 CT55Q8WUE5 264 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 PSMF1Q92530 271 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 RDH5Q92781 318 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 R3HDM4Q96D70 268 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 AJUBAQ96IF1 538 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 POM121L2Q96KW2 1035 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 SIGLEC12Q96PQ1 595 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 SPIN2AQ99865 258 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 SPIN2BQ9BPZ2 258 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 TUBA4BQ9H853 241 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 DNAJC4Q9NNZ3 241 aa9.92□□□□□ -0.82
SYNE2-207ENST00000458046 FAM166BA8MTA8 275 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 ZNF727A8MUV8 499 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 PITX3O75364 302 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 RND3P61587 244 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 HNF4GQ14541 408 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 CEACAM21Q3KPI0 293 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 MKXQ8IYA7 352 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 Q8N1Y9 231 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 IL22RA1Q8N6P7 574 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 RNASEH2CQ8TDP1 164 aaKnown RBP9.91□□□□□ -0.82
SYNE2-207ENST00000458046 SLC25A31Q9H0C2 315 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 RAXQ9Y2V3 346 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 MRPS18CQ9Y3D5 142 aaKnown RBP9.91□□□□□ -0.82
SYNE2-207ENST00000458046 PRRC2CQ9Y520 2896 aaKnown RBP9.91□□□□□ -0.82
SYNE2-207ENST00000458046 USP9XQ93008 2570 aaPredicted RBP9.91□□□□□ -0.82
SYNE2-207ENST00000458046 DCHS1Q96JQ0 3298 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 TRAV39A0A0B4J263 110 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 LINC01620Q4KN68 170 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 NMSQ5H8A3 153 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 OR51H1Q8NH63 302 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 PLPPR1Q8TBJ4 325 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 PTH2Q96A98 100 aa9.91□□□□□ -0.82
SYNE2-207ENST00000458046 URB1O60287 2271 aaKnown RBP9.91□□□□□ -0.82
SYNE2-207ENST00000458046 A0A0G2JRQ6 117 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 PGLYRP1O75594 196 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-207ENST00000458046 SERPINA7P05543 415 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 SMIM6P0DI80 62 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 VDAC1P21796 283 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 CEACAM6P40199 344 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 RHEBQ15382 184 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 CMTM1Q8IZ96 169 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 LFNGQ8NES3 379 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 IL1F10Q8WWZ1 152 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 BBC3Q96PG8 261 aaPredicted RBP9.9□□□□□ -0.82
SYNE2-207ENST00000458046 HIST1H2AAQ96QV6 131 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 PLP1P60201 277 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 RPS23P62266 143 aaKnown RBP9.9□□□□□ -0.82
SYNE2-207ENST00000458046 C3AR1Q16581 482 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 GCSAMLQ5JQS6 135 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 ELOVL1Q9BW60 279 aa9.9□□□□□ -0.82
SYNE2-207ENST00000458046 PPIAL4EA0A075B759 164 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 PRSS46E5RG02 174 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 H0YL77 283 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 H3BQ15 152 aa9.89□□□□□ -0.83
SYNE2-207ENST00000458046 SIAH2O43255 324 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms