RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 NKAIN4Q8IVV8 208 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 OR4C3Q8NH37 302 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 CLDND2Q8NHS1 167 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 KLK6Q92876 244 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 ABHD14AQ9BUJ0 271 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 LINC00597Q9H2U6 94 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF260Q3ZCT1 412 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF660Q6AZW8 331 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 PCGF1Q9BSM1 259 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 FOXJ2Q9P0K8 574 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 ATXN7O15265 892 aaPredicted RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SMAD4Q13485 552 aaKnown RBP4.54□□□□□ -1.68
CSMD3-204ENST00000455883 PAQR9Q6ZVX9 377 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SPRED2Q7Z698 418 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 VKORC1L1Q8N0U8 176 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 HARBI1Q96MB7 349 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 LINC00052Q96N35 136 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 SLC25A22Q9H936 323 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 LANCL2Q9NS86 450 aa4.54□□□□□ -1.68
CSMD3-204ENST00000455883 FGF17O60258 216 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ATP6V0CP27449 155 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 EFNB2P52799 333 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 FAM53AQ6NSI3 398 aaPredicted RBP4.53□□□□□ -1.68
CSMD3-204ENST00000455883 C19orf48Q6RUI8 117 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 C17orf99Q6UX52 265 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ATG4DQ86TL0 474 aaPredicted RBP4.53□□□□□ -1.68
CSMD3-204ENST00000455883 RDH5Q92781 318 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM186Q96B77 213 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 GEMIN7Q9H840 131 aaKnown RBP4.53□□□□□ -1.68
CSMD3-204ENST00000455883 UFC1Q9Y3C8 167 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 TRAV9-2A0A087WT02 112 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 C1orf53Q5VUE5 145 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 OR2Y1Q8NGV0 311 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 J3QR06 171 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ERV3-1Q14264 604 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 PSG5Q15238 335 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 CEACAM21Q3KPI0 293 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 RNF182Q8N6D2 247 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 OR4D11Q8NGI4 311 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 PLSCR4Q9NRQ2 329 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 RPH3ALQ9UNE2 315 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 MARCH11A6NNE9 402 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 AKAP13Q12802 2813 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ATP5G1P05496 136 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 MYOD1P15172 320 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 SRD5A1P18405 259 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 MAGEA5P43359 124 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ATP5G3P48201 142 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM50BP56557 158 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 B4GALNT1Q00973 533 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ATP5G2Q06055 141 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 KRTCAP3Q53RY4 240 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 PLAC9Q5JTB6 97 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 EBLN2Q6P2I7 272 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 OR10D3Q8NH80 312 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM106BQ9NUM4 274 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ZGLP1P0C6A0 271 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 C8orf88P0DMB2 117 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 B4GALT1P15291 398 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 OR2Z1Q8NG97 314 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 OR11G2Q8NGC1 345 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 TAF15Q92804 592 aaKnown RBP eCLIP4.53□□□□□ -1.68
CSMD3-204ENST00000455883 CNRIP1Q96F85 164 aaPredicted RBP4.53□□□□□ -1.68
CSMD3-204ENST00000455883 HSPB9Q9BQS6 159 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 PGPEP1LA6NFU8 196 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 TSPAN2O60636 221 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 RAMP1O60894 148 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 LPAR6P43657 344 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 KIAA0040Q15053 153 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF714Q96N38 554 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 A6NIN4 97 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 PRICKLE4Q2TBC4 344 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 Q56UQ5 140 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 DTX2Q86UW9 622 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 FAM222BQ8WU58 562 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 LINC01553A4QN01 128 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 POM121BA6NF01 834 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ELNP15502 786 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 SLC50A1Q9BRV3 221 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 AGMATQ9BSE5 352 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 SPANXB1Q9NS25 103 aaPredicted RBP4.53□□□□□ -1.68
CSMD3-204ENST00000455883 LIPT2A6NK58 231 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 H3BSH0 61 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 RBP4P02753 201 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 FAM106CPP0CH98 169 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ERVK11-1P61568 191 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 MRPS11P82912 194 aaKnown RBP4.53□□□□□ -1.68
CSMD3-204ENST00000455883 TIAL1Q01085 375 aaKnown RBP eCLIP4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF721Q8TF20 911 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM101Q96IK0 257 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 GFRA4Q9GZZ7 299 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 ZNF257Q9Y2Q1 563 aa4.53□□□□□ -1.68
CSMD3-204ENST00000455883 TMEM189A5PLL7 270 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 EFSO43281 561 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 ICOSLGO75144 302 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 GPR6P46095 362 aaPredicted RBP4.52□□□□□ -1.69
CSMD3-204ENST00000455883 C2orf68Q2NKX9 166 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 C16orf82Q7Z2V1 217 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 TMEM86BQ8N661 226 aa4.52□□□□□ -1.69
CSMD3-204ENST00000455883 SPCS1Q9Y6A9 102 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms