RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 OR52E5Q8NH55 327 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 YPEL4Q96NS1 127 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 ZNF665Q9H7R5 613 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 BOD1L1Q8NFC6 3051 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 A0A1W2PPE2 198 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 M0R1X1 148 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 OR2C1O95371 312 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 ARG1P05089 322 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 BMP5P22003 454 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 C17orf58Q2M2W7 97 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 STUMQ69YW2 141 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 ZFP82Q8N141 532 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 RPP25LQ8N5L8 163 aaKnown RBP12.48□□□□□ -0.41
LDLR-202ENST00000455727 FAM24BQ8N5W8 94 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.48□□□□□ -0.41
LDLR-202ENST00000455727 C2CD4CQ8TF44 421 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 C12orf57Q99622 126 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 FAM234AQ9H0X4 552 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 ELOVL5Q9NYP7 299 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 VAX2Q9UIW0 290 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 SSUH2Q9Y2M2 353 aa12.48□□□□□ -0.41
LDLR-202ENST00000455727 KBTBD11-OT1A0A1B0GTJ5 212 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 MAP1LC3B2A6NCE7 125 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 B4DEV8 164 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 PRRG2O14669 202 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 IFNA1P01562 189 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 OR9G9P0C7N8 305 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 SPCS3P61009 180 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 DOLPP1Q86YN1 238 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 QTRT1Q9BXR0 403 aaKnown RBP12.47□□□□□ -0.41
LDLR-202ENST00000455727 MAP1LC3BQ9GZQ8 125 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 SLC39A9Q9NUM3 307 aa12.47□□□□□ -0.41
LDLR-202ENST00000455727 CXorf65A6NEN9 183 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 ZFP92A6NM28 416 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 IFNA4P05014 189 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 TAGLN2P37802 199 aaKnown RBP12.46□□□□□ -0.41
LDLR-202ENST00000455727 TDGF1P3P51864 188 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 CEBPGP53567 150 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 ELLP55199 621 aaPredicted RBP12.46□□□□□ -0.41
LDLR-202ENST00000455727 DLK1P80370 383 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 TMEM108Q6UXF1 575 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 CA5BP1Q8WTZ4 195 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 DDB2Q92466 427 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 S1PR3Q99500 378 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 LINC00574Q9H8X3 128 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 SIRT7Q9NRC8 400 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 GFOD1Q9NXC2 390 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 IGKV1D-33P01593 117 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 IGKV1-33P01594 117 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 NQO2P16083 231 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 FGF7P21781 194 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 CCKARP32238 428 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 ERVK-16P61578 105 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 TMEM30BQ3MIR4 351 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 RPL39P5Q59GN2 51 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 FAM90A2PQ658T7 463 aa12.46□□□□□ -0.41
LDLR-202ENST00000455727 RBMS3Q6XE24 437 aaKnown RBP12.46□□□□□ -0.41
LDLR-202ENST00000455727 AKAP13Q12802 2813 aa12.46□□□□□ -0.42
LDLR-202ENST00000455727 TRGV10A0A0A0MS01 117 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 A0A0G2JNJ9 132 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 C15orf62A8K5M9 175 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 C16orf97H3BN30 126 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 NDUFS6O75380 124 aaKnown RBP12.45□□□□□ -0.42
LDLR-202ENST00000455727 FGF8P55075 233 aaPredicted RBP12.45□□□□□ -0.42
LDLR-202ENST00000455727 RPP30P78346 268 aaKnown RBP12.45□□□□□ -0.42
LDLR-202ENST00000455727 PNRC1Q12796 327 aaPredicted RBP12.45□□□□□ -0.42
LDLR-202ENST00000455727 FAM201AQ5SY85 155 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 PRAMEF5Q5TYX0 476 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 ACSM6Q6P461 480 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 SSX8Q7RTT4 187 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 LHX4Q969G2 390 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 PLPPR2Q96GM1 343 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 ABHD17AQ96GS6 310 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 Q9UFV3 132 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 PLCE1Q9P212 2302 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 DYSFO75923 2080 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 CTXND1A0A1B0GTU2 59 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 IFNA17P01571 189 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 RAB11AP62491 216 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 TEX36Q5VZQ5 186 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 ZNF788Q6ZQV5 615 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 C1QL4Q86Z23 238 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 OR4A16Q8NH70 328 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 CORO2AQ92828 525 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 GAFA1Q96PS6 74 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 DIRC2Q96SL1 478 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 ZNF251Q9BRH9 671 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 NPCDR1Q9BY65 106 aa12.45□□□□□ -0.42
LDLR-202ENST00000455727 ZFHX2Q9C0A1 2572 aaPredicted RBP12.45□□□□□ -0.42
LDLR-202ENST00000455727 RAI1Q7Z5J4 1906 aaPredicted RBP12.44□□□□□ -0.42
LDLR-202ENST00000455727 C17orf112F2Z3M2 114 aa12.44□□□□□ -0.42
LDLR-202ENST00000455727 SOX15O60248 233 aa12.44□□□□□ -0.42
LDLR-202ENST00000455727 SELLP14151 372 aa12.44□□□□□ -0.42
LDLR-202ENST00000455727 CT45A1Q5HYN5 189 aa12.44□□□□□ -0.42
LDLR-202ENST00000455727 HEPN1Q6WQI6 88 aa12.44□□□□□ -0.42
LDLR-202ENST00000455727 ZNF709Q8N972 641 aa12.44□□□□□ -0.42
LDLR-202ENST00000455727 OR4S2Q8NH73 311 aa12.44□□□□□ -0.42
LDLR-202ENST00000455727 CT45A3Q8NHU0 189 aa12.44□□□□□ -0.42
LDLR-202ENST00000455727 MGAQ8IWI9 3026 aa12.44□□□□□ -0.42
LDLR-202ENST00000455727 hCG_1809904A0A1W2PP81 198 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms