RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 SRRM4A7MD48 611 aaKnown RBP17.32■□□□□ 0.36
PTPRA-208ENST00000455631 LGALS9O00182 355 aa17.32■□□□□ 0.36
PTPRA-208ENST00000455631 GGCTO75223 188 aaKnown RBP17.32■□□□□ 0.36
PTPRA-208ENST00000455631 CIB2O75838 187 aa17.32■□□□□ 0.36
PTPRA-208ENST00000455631 OR2C1O95371 312 aa17.32■□□□□ 0.36
PTPRA-208ENST00000455631 C15orf32Q32M92 178 aa17.32■□□□□ 0.36
PTPRA-208ENST00000455631 ANKRD55Q3KP44 614 aa17.32■□□□□ 0.36
PTPRA-208ENST00000455631 IDO2Q6ZQW0 420 aa17.32■□□□□ 0.36
PTPRA-208ENST00000455631 GGHQ92820 318 aa17.32■□□□□ 0.36
PTPRA-208ENST00000455631 TM2D1Q9BX74 207 aa17.32■□□□□ 0.36
PTPRA-208ENST00000455631 OR2J3O76001 311 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 UNC119Q13432 240 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 PRSS8Q16651 343 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 RTL8BQ17RB0 113 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 VMA21Q3ZAQ7 101 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 TM4SF20Q53R12 229 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 TMEM177Q53S58 311 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 FAM209BQ5JX69 171 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 NECAP1Q8NC96 275 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 PHLDA1Q8WV24 401 aaPredicted RBP17.31■□□□□ 0.36
PTPRA-208ENST00000455631 OR2D2Q9H210 308 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 Q9N2K0 584 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 MLXQ9UH92 298 aa17.31■□□□□ 0.36
PTPRA-208ENST00000455631 IGKV1-6A0A0C4DH72 117 aa17.3■□□□□ 0.36
PTPRA-208ENST00000455631 ATF4P18848 351 aaPredicted RBP17.3■□□□□ 0.36
PTPRA-208ENST00000455631 RASSF2P50749 326 aa17.3■□□□□ 0.36
PTPRA-208ENST00000455631 APOC4P55056 127 aa17.3■□□□□ 0.36
PTPRA-208ENST00000455631 Q6ZWC4 215 aa17.3■□□□□ 0.36
PTPRA-208ENST00000455631 TMEM217Q8N7C4 229 aa17.3■□□□□ 0.36
PTPRA-208ENST00000455631 C12orf4Q9NQ89 552 aa17.3■□□□□ 0.36
PTPRA-208ENST00000455631 SDHAF2Q9NX18 166 aa17.3■□□□□ 0.36
PTPRA-208ENST00000455631 DMRT1Q9Y5R6 373 aa17.3■□□□□ 0.36
PTPRA-208ENST00000455631 RYR1P21817 5038 aa17.3■□□□□ 0.36
PTPRA-208ENST00000455631 A0A0A6YYD4 124 aa17.29■□□□□ 0.36
PTPRA-208ENST00000455631 MAPK3P27361 379 aaPredicted RBP17.29■□□□□ 0.36
PTPRA-208ENST00000455631 TAS2R43P59537 309 aa17.29■□□□□ 0.36
PTPRA-208ENST00000455631 MED21Q13503 144 aa17.29■□□□□ 0.36
PTPRA-208ENST00000455631 TEX45Q8NA69 505 aa17.29■□□□□ 0.36
PTPRA-208ENST00000455631 ZNF320A2RRD8 509 aa17.28■□□□□ 0.36
PTPRA-208ENST00000455631 TMEM213A2RRL7 107 aa17.28■□□□□ 0.36
PTPRA-208ENST00000455631 UBE2KP61086 200 aa17.28■□□□□ 0.36
PTPRA-208ENST00000455631 BTNL8Q6UX41 500 aa17.28■□□□□ 0.36
PTPRA-208ENST00000455631 UXS1Q8NBZ7 420 aa17.28■□□□□ 0.36
PTPRA-208ENST00000455631 ZNF485Q8NCK3 441 aa17.28■□□□□ 0.36
PTPRA-208ENST00000455631 TMEM80Q96HE8 168 aa17.28■□□□□ 0.36
PTPRA-208ENST00000455631 SOCS1O15524 211 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 ACTL6BO94805 426 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 IGHV3-23P01764 117 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 SRMP19623 302 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 CELP19835 753 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 ARL3P36405 182 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 MAP2K4P45985 399 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 TAGLNQ01995 201 aaKnown RBP17.27■□□□□ 0.36
PTPRA-208ENST00000455631 GLT8D1Q68CQ7 371 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 GPHB5Q86YW7 130 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 SPIN2AQ99865 258 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 SPIN2BQ9BPZ2 258 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 C9orf16Q9BUW7 83 aa17.27■□□□□ 0.36
PTPRA-208ENST00000455631 TMEM14DPA8MWL7 114 aa17.26■□□□□ 0.35
PTPRA-208ENST00000455631 CRYZL1O95825 349 aa17.26■□□□□ 0.35
PTPRA-208ENST00000455631 RRASP10301 218 aa17.26■□□□□ 0.35
PTPRA-208ENST00000455631 C10orf55Q5SWW7 151 aa17.26■□□□□ 0.35
PTPRA-208ENST00000455631 TTC9CQ8N5M4 171 aa17.26■□□□□ 0.35
PTPRA-208ENST00000455631 OR1L6Q8NGR2 347 aa17.26■□□□□ 0.35
PTPRA-208ENST00000455631 C5orf30Q96GV9 206 aa17.26■□□□□ 0.35
PTPRA-208ENST00000455631 ZNF430Q9H8G1 570 aaPredicted RBP17.26■□□□□ 0.35
PTPRA-208ENST00000455631 A8MWP6 167 aa17.25■□□□□ 0.35
PTPRA-208ENST00000455631 CD3GP09693 182 aa17.25■□□□□ 0.35
PTPRA-208ENST00000455631 RBM48Q5RL73 367 aaKnown RBP17.25■□□□□ 0.35
PTPRA-208ENST00000455631 C1orf100Q5SVJ3 147 aa17.25■□□□□ 0.35
PTPRA-208ENST00000455631 TTC23Q5W5X9 447 aa17.25■□□□□ 0.35
PTPRA-208ENST00000455631 FBXL7Q9UJT9 491 aa17.25■□□□□ 0.35
PTPRA-208ENST00000455631 S4R3C0 116 aa17.25■□□□□ 0.35
PTPRA-208ENST00000455631 TRDCB7Z8K6 153 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 UBE2CO00762 179 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 CREBL2O60519 120 aaPredicted RBP17.24■□□□□ 0.35
PTPRA-208ENST00000455631 SERPINB10P48595 397 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 QRFPP83859 136 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 PRR20EP86478 221 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 PRR20CP86479 221 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 PRR20DP86480 221 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 PRR20BP86481 221 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 PRR20AP86496 221 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 INSL4Q14641 139 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 FAM106AQ4KMX7 169 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 CLEC19AQ6UXS0 136 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 RBPMS2Q6ZRY4 209 aaKnown RBP17.24■□□□□ 0.35
PTPRA-208ENST00000455631 CEACAM19Q7Z692 300 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 CCDC140Q96MF4 163 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 CMSS1Q9BQ75 279 aaKnown RBP17.24■□□□□ 0.35
PTPRA-208ENST00000455631 URM1Q9BTM9 101 aaKnown RBP17.24■□□□□ 0.35
PTPRA-208ENST00000455631 LPAR5Q9H1C0 372 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 UBQLN2Q9UHD9 624 aa17.24■□□□□ 0.35
PTPRA-208ENST00000455631 BET1O15155 118 aa17.23■□□□□ 0.35
PTPRA-208ENST00000455631 OR4A47Q6IF82 309 aa17.23■□□□□ 0.35
PTPRA-208ENST00000455631 C19orf35Q6ZS72 473 aa17.23■□□□□ 0.35
PTPRA-208ENST00000455631 LRRTM1Q86UE6 522 aa17.23■□□□□ 0.35
PTPRA-208ENST00000455631 SLC25A42Q86VD7 318 aa17.23■□□□□ 0.35
PTPRA-208ENST00000455631 ZNF555Q8NEP9 628 aa17.23■□□□□ 0.35
PTPRA-208ENST00000455631 FBLIM1Q8WUP2 373 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms