RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 CRABP1P29762 137 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 FLI1Q01543 452 aaPredicted RBP2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 ACOT6Q3I5F7 207 aaPredicted RBP2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 HIST2H3PS2Q5TEC6 136 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 HIST2H3AQ71DI3 136 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 PPP1R2P1Q96PQ5 205 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 DUSP21Q9H596 190 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 KLK5Q9Y337 293 aaPredicted RBP2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 ZSWIM8A7E2V4 1837 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 SPATA31E1Q6ZUB1 1445 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 MTUS2Q5JR59 1369 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 ABCC12Q96J65 1359 aa2.23□□□□□ -2.05
HMGN3P1-201ENST00000453847 PTPRJQ12913 1337 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 BHLHE40O14503 412 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 SOD1P00441 154 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 SERPINA1P01009 418 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 NEFHP12036 1026 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 ZNF140P52738 457 aaPredicted RBP2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 BIKQ13323 160 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 BATFQ16520 125 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 AMMECR1LQ6DCA0 310 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 C5orf46Q6UWT4 87 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 SPATA12Q7Z6I5 190 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 OR11H1Q8NG94 326 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 OR10P1Q8NGE3 313 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 OR2D3Q8NGH3 330 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 RAB2BQ8WUD1 216 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 RAD51AP1Q96B01 352 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 GLTPQ9NZD2 209 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 MMACHCQ9Y4U1 282 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 DCCP43146 1447 aa2.22□□□□□ -2.05
HMGN3P1-201ENST00000453847 ZNF638Q14966 1978 aaKnown RBP2.21□□□□□ -2.05
HMGN3P1-201ENST00000453847 LOC102725191A0A1B0GVB3 256 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 A0A1W2PNU3 283 aaPredicted RBP2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 RTL8CO15255 209 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 PIK3C2GO75747 1445 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 LY6HO94772 140 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 CYBAP13498 195 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 HIST1H1TP22492 207 aaPredicted RBP2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 SERPINB10P48595 397 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 TAS2R45P59539 299 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 PSG4Q00888 419 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 HTR4Q13639 388 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 TAF1AQ15573 450 aaPredicted RBP2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 ZNF141Q15928 474 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 LGALSLQ3ZCW2 172 aaPredicted RBP2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 TNFAIP8L3Q5GJ75 292 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 RASL11AQ6T310 242 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 ZNF561Q8N587 486 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 ZNF676Q8N7Q3 588 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 DAND5Q8N907 189 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 ERMAPQ96PL5 475 aaPredicted RBP2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 C9orf16Q9BUW7 83 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 DCSTAMPQ9H295 470 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 ASF1BQ9NVP2 202 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 IDI2-AS1Q9NZ38 188 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 MRPL27Q9P0M9 148 aaKnown RBP2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 TAAR3PQ9P1P4 343 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 UNC13AQ9UPW8 1703 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 PRELID3BQ9Y3B1 194 aa2.21□□□□□ -2.06
HMGN3P1-201ENST00000453847 ADGRL1O94910 1474 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 WDR90Q96KV7 1748 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 FAM236DA0A1B0GTK5 79 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 A0A1W2PNN7 141 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 PQLC2LA1A4F0 135 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 C9JCJ5 164 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 SLC17A3O00476 420 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 OR5F1O95221 314 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 FAM236CP0DP71 79 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 CD79AP11912 226 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 CRHBPP24387 322 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 ATP6V0CP27449 155 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 AKR1C2P52895 323 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 ARF6P62330 175 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 BTN3A2P78410 334 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 EDDM3AQ14507 147 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 TMEM97Q5BJF2 176 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 NOXRED1Q6NXP6 359 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 LPCAT3Q6P1A2 487 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 MSRB3Q8IXL7 192 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 FNDC9Q8TBE3 224 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 RPS4Y2Q8TD47 263 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 SFRP2Q96HF1 295 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 IGF2BP2-AS1Q96M15 143 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 NMNAT3Q96T66 252 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 NKX6-2Q9C056 277 aaPredicted RBP2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 FKBP14Q9NWM8 211 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 VPREB3Q9UKI3 123 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 FBXO5Q9UKT4 447 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 SNX12Q9UMY4 172 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 NID2Q14112 1375 aa2.2□□□□□ -2.06
HMGN3P1-201ENST00000453847 NCOA1Q15788 1441 aa2.19□□□□□ -2.06
HMGN3P1-201ENST00000453847 A0A087WUU8 490 aa2.19□□□□□ -2.06
HMGN3P1-201ENST00000453847 IGHV1-69-2A0A0G2JMI3 117 aa2.19□□□□□ -2.06
HMGN3P1-201ENST00000453847 MDFIC2A0A1B0GVS7 189 aa2.19□□□□□ -2.06
HMGN3P1-201ENST00000453847 ZNF878C9JN71 531 aa2.19□□□□□ -2.06
HMGN3P1-201ENST00000453847 CD5P06127 495 aa2.19□□□□□ -2.06
HMGN3P1-201ENST00000453847 CST2P09228 141 aa2.19□□□□□ -2.06
HMGN3P1-201ENST00000453847 FAM228BP0C875 321 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms