RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 PSMF1Q92530 271 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 MRPL24Q96A35 216 aaKnown RBP6.47□□□□□ -1.37
BRCC3-208ENST00000453705 UBE2E2Q96LR5 201 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 C20orf144Q9BQM9 153 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 SNHG12Q9BXW3 62 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 CARHSP1Q9Y2V2 147 aaKnown RBP6.47□□□□□ -1.37
BRCC3-208ENST00000453705 DOCK10Q96BY6 2186 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 A0A1W2PNU3 283 aaPredicted RBP6.47□□□□□ -1.37
BRCC3-208ENST00000453705 MEGF11A6BM72 1044 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 IFITM5A6NNB3 132 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 ELK1P19419 428 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 OR7A5Q15622 319 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 HOGA1Q86XE5 327 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 OR1J4Q8NGS1 313 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 TCTEX1D2Q8WW35 142 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 GNRHR2Q96P88 292 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 SPEGQ15772 3267 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 CHD8Q9HCK8 2581 aa6.47□□□□□ -1.37
BRCC3-208ENST00000453705 IGKV3D-15A0A087WSY6 115 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 SPAARA0A1B0GVQ0 90 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 C17orf51A8MQB3 221 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 VWC2LB2RUY7 222 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 TMEM178BH3BS89 294 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 ZNF593O00488 134 aaPredicted RBP6.46□□□□□ -1.37
BRCC3-208ENST00000453705 IGHV2-5P01817 119 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 CCL3P10147 92 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 ATF1P18846 271 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 GNG5P63218 68 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 C1orf100Q5SVJ3 147 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 STAC2Q6ZMT1 411 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 C16orf47Q6ZP98 133 aaPredicted RBP6.46□□□□□ -1.37
BRCC3-208ENST00000453705 FBXL15Q9H469 300 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 ACKR4Q9NPB9 350 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 AURKAIP1Q9NWT8 199 aaPredicted RBP6.46□□□□□ -1.37
BRCC3-208ENST00000453705 IDI2-AS1Q9NZ38 188 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 HSPB8Q9UJY1 196 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 TP53TG1Q9Y2A0 90 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 V9GY05 133 aa6.46□□□□□ -1.37
BRCC3-208ENST00000453705 WDFY3Q8IZQ1 3526 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 NCOR2Q9Y618 2525 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 OR5H1A6NKK0 313 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 HBE1P02100 147 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 CD164Q04900 197 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 WDR38Q5JTN6 314 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 TMEM244Q5VVB8 128 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 OR10K2Q6IF99 312 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 TEX45Q8NA69 505 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 FNDC9Q8TBE3 224 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 RXFP4Q8TDU9 374 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 PNPLA2Q96AD5 504 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 MEGF9Q9H1U4 602 aa6.46□□□□□ -1.38
BRCC3-208ENST00000453705 TMEM218A2RU14 115 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 NAP1L6A6NFF2 107 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 OR2A4O95047 310 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 HLA-DQA2P01906 255 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 EIF4EP06730 217 aaKnown RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 MXD1Q05195 221 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 RNASE12Q5GAN4 147 aaKnown RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 TMEM255AQ5JRV8 349 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 LDLRAD2Q5SZI1 272 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 GGNBP1Q5YKI7 109 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 OLFML2AQ68BL7 652 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 ZNF57Q68EA5 555 aaPredicted RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 Q6ZRG5 221 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 ZNF627Q7L945 461 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 NAA40Q86UY6 237 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 C20orf196Q8IYI0 205 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 OR10G4Q8NGN3 311 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 SMIM4Q8WVI0 70 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 RDH5Q92781 318 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 OR2A7Q96R45 310 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 SLC25A39Q9BZJ4 359 aaPredicted RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 LINC00470Q9BZP3 86 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 PNRC2Q9NPJ4 139 aaKnown RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 CELSR3Q9NYQ7 3312 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 FREM3P0C091 2139 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 ANKRD11Q6UB99 2663 aaPredicted RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 COLCA2A8K830 154 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 FAM90A26D6RGX4 464 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 SLC17A2O00624 439 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 HLA-DOBP13765 273 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 ZNF823P16415 610 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 AZU1P20160 251 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 CLDN17P56750 224 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 GRB2P62993 217 aaKnown RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 DGCR2P98153 550 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 POU3F1Q03052 451 aaPredicted RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 BAXQ07812 192 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 CLINT1Q14677 625 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 SLC25A35Q3KQZ1 300 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 TMEM97Q5BJF2 176 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 PRR31Q5SQ13 230 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 TMEM78Q5T7P6 136 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 ZNF660Q6AZW8 331 aaPredicted RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 LYPD4Q6UWN0 246 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 GGNQ86UU5 652 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 AMELYQ99218 206 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 SSBP4Q9BWG4 385 aaPredicted RBP6.45□□□□□ -1.38
BRCC3-208ENST00000453705 GVINP1Q7Z2Y8 2422 aa6.45□□□□□ -1.38
BRCC3-208ENST00000453705 CEACAM18A8MTB9 384 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms