RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 LURAP1LQ8IV03 231 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 CCDC71LQ8N9Z2 235 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 CD300LFQ8TDQ1 290 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 TCTEX1D2Q8WW35 142 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 EAF1Q96JC9 268 aaPredicted RBP9.27□□□□□ -0.92
SCN9A-204ENST00000452182 ESM1Q9NQ30 184 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 SLC35D1Q9NTN3 355 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 VSIG4Q9Y279 399 aa9.27□□□□□ -0.92
SCN9A-204ENST00000452182 H7C2Y5 167 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 B3GALNT1O75752 331 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 RLN1P04808 185 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 PI3P19957 117 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 CD24P25063 80 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 BRWD1-AS2P59051 145 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 DCTN2Q13561 401 aaKnown RBP9.27□□□□□ -0.93
SCN9A-204ENST00000452182 TMEM177Q53S58 311 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 CCBE1Q6UXH8 406 aaPredicted RBP9.27□□□□□ -0.93
SCN9A-204ENST00000452182 TBC1D26Q86UD7 250 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 POC5Q8NA72 575 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 OR8H1Q8NGG4 311 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 OR4C13Q8NGP0 309 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 GPHA2Q96T91 129 aa9.27□□□□□ -0.93
SCN9A-204ENST00000452182 LIN7CQ9NUP9 197 aaKnown RBP9.27□□□□□ -0.93
SCN9A-204ENST00000452182 FAM240BA0A1B0GVZ2 78 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 FCGR3BO75015 233 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 OR2F2O95006 317 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 IGKV1-16P04430 117 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 RNASE1P07998 156 aaKnown RBP9.26□□□□□ -0.93
SCN9A-204ENST00000452182 TMEM11P17152 192 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 RPL15P61313 204 aaKnown RBP9.26□□□□□ -0.93
SCN9A-204ENST00000452182 CBX3Q13185 183 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 HES1Q14469 280 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 SPAG16Q8N0X2 631 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 DUSP18Q8NEJ0 188 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 OR51H1Q8NH63 302 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 OR4S2Q8NH73 311 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 OSR1Q8TAX0 266 aaPredicted RBP9.26□□□□□ -0.93
SCN9A-204ENST00000452182 FLYWCH2Q96CP2 140 aaKnown RBP9.26□□□□□ -0.93
SCN9A-204ENST00000452182 RBM14Q96PK6 669 aaKnown RBP9.26□□□□□ -0.93
SCN9A-204ENST00000452182 CHIAQ9BZP6 476 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 RAB18Q9NP72 206 aa9.26□□□□□ -0.93
SCN9A-204ENST00000452182 CRYM-AS1A6NIL9 109 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 TCRBP04435 133 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 LGALS7P47929 136 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 TAS2R31P59538 309 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 UBE2MP61081 183 aaKnown RBP9.25□□□□□ -0.93
SCN9A-204ENST00000452182 FBLN7Q53RD9 439 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 TMEM128Q5BJH2 165 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 CENPSQ8N2Z9 138 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 NPBQ8NG41 125 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 TMEM230Q96A57 120 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 C1RLQ9NZP8 487 aa9.25□□□□□ -0.93
SCN9A-204ENST00000452182 C3orf85A0A1B0GTC6 90 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 H0Y980 276 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 FGF16O43320 207 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 RAMP3O60896 148 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 SPDEFO95238 335 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 CRYZL1O95825 349 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 HPRT1P00492 218 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 UBA52P62987 128 aaKnown RBP9.24□□□□□ -0.93
SCN9A-204ENST00000452182 DHODHQ02127 395 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 TNP2Q05952 138 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 LY6EQ16553 131 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 C11orf88Q6PI97 169 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 NRARPQ7Z6K4 114 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 TMED4Q7Z7H5 227 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 SLC25A42Q86VD7 318 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 SGPP2Q8IWX5 399 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 ADAD2Q8NCV1 583 aaKnown RBP9.24□□□□□ -0.93
SCN9A-204ENST00000452182 ENKURQ8TC29 256 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 ZFAND2BQ8WV99 257 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 GALNT14Q96FL9 552 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 SLC25A33Q9BSK2 321 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 ALX4Q9H161 411 aaPredicted RBP9.24□□□□□ -0.93
SCN9A-204ENST00000452182 C20orf85Q9H1P6 137 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 NAA60Q9H7X0 242 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 PLEKHA2Q9HB19 425 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 PLSCR3Q9NRY6 295 aa9.24□□□□□ -0.93
SCN9A-204ENST00000452182 TEX13DA0A0J9YY54 714 aaPredicted RBP9.23□□□□□ -0.93
SCN9A-204ENST00000452182 M0QZK8 103 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 GPR137BO60478 399 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 NDUFA3O95167 84 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 RPA2P15927 270 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 MECP2P51608 486 aaKnown RBP9.23□□□□□ -0.93
SCN9A-204ENST00000452182 RPS16P62249 146 aaKnown RBP9.23□□□□□ -0.93
SCN9A-204ENST00000452182 HNF4GQ14541 408 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 ZNF585BQ52M93 769 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 OR2B11Q5JQS5 317 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 TMEM219Q86XT9 240 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 RITA1Q96K30 269 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 HARBI1Q96MB7 349 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 DUX5Q96PT3 197 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 TP53RKQ96S44 253 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 TSNAXQ99598 290 aaKnown RBP9.23□□□□□ -0.93
SCN9A-204ENST00000452182 AIFM2Q9BRQ8 373 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 COMMD9Q9P000 198 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 FLVCR2Q9UPI3 526 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 KCNIP3Q9Y2W7 256 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 MOB4Q9Y3A3 225 aa9.23□□□□□ -0.93
SCN9A-204ENST00000452182 NUBP2Q9Y5Y2 271 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms