RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 PF4P02776 101 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 SPINK8P0C7L1 97 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 CDAP32320 146 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 TMEM30BQ3MIR4 351 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 PARP4Q9UKK3 1724 aaKnown RBP7.78□□□□□ -1.16
NIPBL-202ENST00000448238 HSD52Q0P140 79 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 SEMA5BQ9P283 1151 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 IL36RNQ9UBH0 155 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 USF3Q68DE3 2245 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 SHISA7A6NL88 538 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 ZNHIT1O43257 154 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 PPBPP02775 128 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 ARL14EPLP0DKL9 152 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 SMAD4Q13485 552 aaKnown RBP7.78□□□□□ -1.16
NIPBL-202ENST00000448238 SPRED2Q7Z698 418 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 C9orf62Q8N4C0 152 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 UBL5Q9BZL1 73 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 PRSS21Q9Y6M0 314 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 LDLRAD4O15165 306 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 TFPI2P48307 235 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 MAGI3Q5TCQ9 1506 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 H0Y980 276 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 FAM209AQ5JX71 171 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 GUSBP11Q6P575 273 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 TMEM171Q8WVE6 324 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 MARS2Q96GW9 593 aaKnown RBP7.78□□□□□ -1.16
NIPBL-202ENST00000448238 SERGEFQ9UGK8 458 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 A0A1W2PRS3 328 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 IL11P20809 199 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 EEF1AKMT3Q96AZ1 226 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 IFITM2Q01629 132 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 COQ2Q96H96 371 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 WDR54Q9H977 334 aa7.78□□□□□ -1.16
NIPBL-202ENST00000448238 C1orf167Q5SNV9 1468 aa7.77□□□□□ -1.16
NIPBL-202ENST00000448238 PPP6CO00743 305 aa7.77□□□□□ -1.16
NIPBL-202ENST00000448238 RBM3P98179 157 aaKnown RBP7.77□□□□□ -1.16
NIPBL-202ENST00000448238 RLN3Q8WXF3 142 aa7.77□□□□□ -1.16
NIPBL-202ENST00000448238 VKORC1Q9BQB6 163 aa7.77□□□□□ -1.16
NIPBL-202ENST00000448238 ZNF32P17041 273 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 SRSF1Q07955 248 aaKnown RBP eCLIP7.77□□□□□ -1.17
NIPBL-202ENST00000448238 TMEM190Q8WZ59 177 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 WNT10AQ9GZT5 417 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 SMPXQ9UHP9 88 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 EDIL3O43854 480 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 APOHP02749 345 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-202ENST00000448238 LEPP41159 167 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 MAGEA5P43359 124 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 ST20Q9HBF5 79 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 NKX2-6A6NCS4 301 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 INS-IGF2F8WCM5 200 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 INSP01308 110 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 SELENOPP49908 381 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 RHOGP84095 191 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 ATP5G2Q06055 141 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 IL11RAQ14626 422 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 CCL14Q16627 93 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 ZNF750Q32MQ0 723 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 CACNG8Q8WXS5 425 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 NCR2O95944 276 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 TIMP1P01033 207 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 SPNP16150 400 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 CXorf66Q5JRM2 361 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-202ENST00000448238 EPDR1Q9UM22 224 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 LEPROTO15243 131 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 NDUFA2O43678 99 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 TNFSF15O95150 251 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 COL9A2Q14055 689 aaPredicted RBP7.77□□□□□ -1.17
NIPBL-202ENST00000448238 CCSMST1Q4G0I0 132 aa7.77□□□□□ -1.17
NIPBL-202ENST00000448238 TRGV2A0A075B6R0 118 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 SOX8P57073 446 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 MRPL43Q8N983 215 aaKnown RBP7.76□□□□□ -1.17
NIPBL-202ENST00000448238 TMEM74BQ9NUR3 256 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 HS3ST3B1Q9Y662 390 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 TMEM8BA6NDV4 472 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 HCRTO43612 131 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 CRYBB2P43320 205 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 UCP2P55851 309 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 C5orf47Q569G3 176 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 CIARTQ8N365 385 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-202ENST00000448238 FMC1Q96HJ9 113 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 NABP2Q9BQ15 211 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 PTGESO14684 152 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 CLDN10P78369 228 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 ZNF658BQ4V348 819 aaPredicted RBP7.76□□□□□ -1.17
NIPBL-202ENST00000448238 ZNF774Q6NX45 483 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 MFRPQ9BY79 579 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 GZMBP10144 247 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 DUX3Q96PT4 197 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 M0R381 172 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 PLPP3O14495 311 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 LINC00158P58513 81 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 ASB10Q8WXI3 467 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 TAF15Q92804 592 aaKnown RBP eCLIP7.76□□□□□ -1.17
NIPBL-202ENST00000448238 NDUFAF3Q9BU61 184 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 C9JCJ5 164 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 AGRNO00468 2067 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 A0A0G2JLM5 398 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 PAX4O43316 350 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 C1QTNF9P0C862 333 aa7.76□□□□□ -1.17
NIPBL-202ENST00000448238 WDR82Q6UXN9 313 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms