RNA–Protein interactions for RNA: ENST00000448078.1

USP49-205, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 3

Gene USP49, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-205ENST00000448078 METTL15A6NJ78 407 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 ZNF736B4DX44 427 aaPredicted RBP4.32□□□□□ -1.72
USP49-205ENST00000448078 H7C2Y5 167 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 SLC22A1O15245 554 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 RBBP9O75884 186 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 SULT1C4O75897 302 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 CSN3P07498 182 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 GSTT2P0CG29 244 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 GSTT2BP0CG30 244 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 SNRPEP62304 92 aaKnown RBP4.32□□□□□ -1.72
USP49-205ENST00000448078 ZNF45Q02386 682 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 PAX5Q02548 391 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 LRRC36Q1X8D7 754 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 FAM98BQ52LJ0 330 aaKnown RBP4.32□□□□□ -1.72
USP49-205ENST00000448078 RBPMS2Q6ZRY4 209 aaKnown RBP4.32□□□□□ -1.72
USP49-205ENST00000448078 TRPT1Q86TN4 253 aaKnown RBP4.32□□□□□ -1.72
USP49-205ENST00000448078 SLC35F2Q8IXU6 374 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 POC5Q8NA72 575 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 LFNGQ8NES3 379 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 OR10G2Q8NGC3 310 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 C11orf45Q8TAV5 145 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 SAT2Q96F10 170 aaPredicted RBP4.32□□□□□ -1.72
USP49-205ENST00000448078 MRPL48Q96GC5 212 aaKnown RBP4.32□□□□□ -1.72
USP49-205ENST00000448078 FEVQ99581 238 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 TSNAXQ99598 290 aaKnown RBP4.32□□□□□ -1.72
USP49-205ENST00000448078 BTBD10Q9BSF8 475 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 SPACA1Q9HBV2 294 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 FGFR1OP2Q9NVK5 253 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 CLN6Q9NWW5 311 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 TVP23BQ9NYZ1 205 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 RCC2Q9P258 522 aaKnown RBP4.32□□□□□ -1.72
USP49-205ENST00000448078 FBXO7Q9Y3I1 522 aa4.32□□□□□ -1.72
USP49-205ENST00000448078 PLECQ15149 4684 aaKnown RBP4.31□□□□□ -1.72
USP49-205ENST00000448078 KIAA1109Q2LD37 5005 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 MCRIP1C9JLW8 97 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 C11orf94C9JXX5 98 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 PTGES3LE9PB15 166 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 OR7C1O76099 320 aaPredicted RBP4.31□□□□□ -1.72
USP49-205ENST00000448078 MT-ND2P03891 347 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 CD7P09564 240 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 OR2T7P0C7T2 308 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 ATP6V1B2P21281 511 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 SSTR5P35346 364 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 KIR2DS2P43631 304 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 ZNF137PP52743 207 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 CMC4P56277 68 aaPredicted RBP4.31□□□□□ -1.72
USP49-205ENST00000448078 DEFB114Q30KQ6 69 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 FAM106AQ4KMX7 169 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 ATAD3CQ5T2N8 411 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 GLT8D1Q68CQ7 371 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 ELP2Q6IA86 826 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 OR2T5Q6IEZ7 315 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 LINC00596Q86U02 117 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 OR5T1Q8NG75 326 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 OR2T29Q8NH02 315 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 CASTOR1Q8WTX7 329 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 CCDC107Q8WV48 283 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 RFT1Q96AA3 541 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 ATP6V1G3Q96LB4 118 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 OR2S2Q9NQN1 319 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 FBXL17Q9UF56 701 aa4.31□□□□□ -1.72
USP49-205ENST00000448078 V9GYY5 206 aaPredicted RBP4.31□□□□□ -1.72
USP49-205ENST00000448078 DSCAML1Q8TD84 2053 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 IGHV3-43A0A0B4J1X8 118 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 TRAV39A0A0B4J263 110 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 TRAV24A0A0B4J272 114 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 KIR2DL5BA0A0G2JN68 375 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 KIR2DL5BA0A0G2JPC4 375 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 LOC107986453A0A1B0GWG9 222 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 IZUMO1RA6ND01 250 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 PGPEP1LA6NFU8 196 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 HMGB1P1B2RPK0 211 aaPredicted RBP4.3□□□□□ -1.72
USP49-205ENST00000448078 IGLL5B9A064 214 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 AIPO00170 330 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 SOX15O60248 233 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 ZNF780AO75290 641 aaPredicted RBP4.3□□□□□ -1.72
USP49-205ENST00000448078 FADS2O95864 444 aaKnown RBP4.3□□□□□ -1.72
USP49-205ENST00000448078 SEMG1P04279 462 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 SCTP09683 121 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 IGHV3-43DP0DP04 118 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 ANXA8P13928 327 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 HSD17B1P14061 328 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 CDK5Q00535 292 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 ATP5G2Q06055 141 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 GPR176Q14439 515 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 FXYD3Q14802 87 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 CDK5R1Q15078 307 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 KISS1Q15726 138 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 CT45A1Q5HYN5 189 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 UTF1Q5T230 341 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 RSBN1Q5VWQ0 802 aaPredicted RBP4.3□□□□□ -1.72
USP49-205ENST00000448078 ZNF57Q68EA5 555 aaPredicted RBP4.3□□□□□ -1.72
USP49-205ENST00000448078 ZNF343Q6P1L6 599 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 IL34Q6ZMJ4 242 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 Q75L30 129 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 SERPINA12Q8IW75 414 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 KIR2DL5AQ8N109 375 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 SUMF2Q8NBJ7 301 aa4.3□□□□□ -1.72
USP49-205ENST00000448078 ADAD2Q8NCV1 583 aaKnown RBP4.3□□□□□ -1.72
USP49-205ENST00000448078 PXT1Q8NFP0 134 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms