RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 TNFSF12O43508 249 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 FCGR3BO75015 233 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 IGHG4P01861 327 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 PF4P02776 101 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 EGR2P11161 476 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-204ENST00000446876 NAT1P18440 290 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 HLA-DMAP28067 261 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 PPIFP30405 207 aaKnown RBP11.6□□□□□ -0.55
HDAC4-204ENST00000446876 TMBIM6P55061 237 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 GNB1P62873 340 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 SSBP2P81877 361 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-204ENST00000446876 CBX3Q13185 183 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 FOXE3Q13461 319 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 EIF4EBP1Q13541 118 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-204ENST00000446876 ZNF660Q6AZW8 331 aaPredicted RBP11.6□□□□□ -0.55
HDAC4-204ENST00000446876 TMEM17Q86X19 198 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 CASTOR1Q8WTX7 329 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 TCTEX1D2Q8WW35 142 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 DUX3Q96PT4 197 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 SLC5A7Q9GZV3 580 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 KLK15Q9H2R5 256 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 MIXL1Q9H2W2 232 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 EXTL2Q9UBQ6 330 aa11.6□□□□□ -0.55
HDAC4-204ENST00000446876 SLC22A5O76082 557 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 CRYGBP07316 175 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 ELANEP08246 267 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 RRASP10301 218 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 PSMB8P28062 276 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 LGALS7P47929 136 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 DEFA6Q01524 100 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 TAGLNQ01995 201 aaKnown RBP11.59□□□□□ -0.55
HDAC4-204ENST00000446876 DEFB136Q30KP8 78 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 C19orf54Q5BKX5 351 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 IDO2Q6ZQW0 420 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 PPP1R27Q86WC6 154 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 LYSMD2Q8IV50 215 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 LAX1Q8IWV1 398 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 OR5H2Q8NGV7 314 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 GRPEL2Q8TAA5 225 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 DYNC2LI1Q8TCX1 351 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 ZFP57Q9NU63 452 aa11.59□□□□□ -0.55
HDAC4-204ENST00000446876 A0A1W2PN81 502 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 H3BMQ9 156 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 CTDSP2O14595 271 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 RGS5O15539 181 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 SOX15O60248 233 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 HRH1P35367 487 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 CHRNA7P36544 502 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 CRIP2P52943 208 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-204ENST00000446876 BRWD1-AS2P59051 145 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 HERV-K104P61576 105 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 DYRK1AQ13627 763 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 FXYD3Q14802 87 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 MRGPRG-AS1Q2M3A8 158 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 OVCH2Q7RTZ1 564 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 ZNF695Q8IW36 515 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 MFSD4AQ8N468 514 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 RNF152Q8N8N0 203 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 MINDY2Q8NBR6 621 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 GIMAP1Q8WWP7 306 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 ARPC1AQ92747 370 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 ISOC1Q96CN7 298 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 HSD17B10Q99714 261 aaKnown RBP11.58□□□□□ -0.56
HDAC4-204ENST00000446876 ZNF2Q9BSG1 426 aaPredicted RBP11.58□□□□□ -0.56
HDAC4-204ENST00000446876 DCUN1D5Q9BTE7 237 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 FXYD6Q9H0Q3 95 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 SCPEP1Q9HB40 452 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 SCOCQ9UIL1 159 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 PRELID3BQ9Y3B1 194 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 NUBP2Q9Y5Y2 271 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 NOTCH1P46531 2555 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 TNCP24821 2201 aa11.58□□□□□ -0.56
HDAC4-204ENST00000446876 MEGF8Q7Z7M0 2845 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 NOL3O60936 208 aaKnown RBP11.57□□□□□ -0.56
HDAC4-204ENST00000446876 IGLV1-40P01703 118 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 SAA1P0DJI8 122 aaPredicted RBP11.57□□□□□ -0.56
HDAC4-204ENST00000446876 CD33P20138 364 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 TAS2R46P59540 309 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 OXLD1Q5BKU9 147 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 SAMD5Q5TGI4 173 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 UNQ5815/PRO19632Q6UWF5 114 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 ZNF562Q6V9R5 426 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 ZNF818PQ6ZRF7 136 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 VKORC1L1Q8N0U8 176 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 LFNGQ8NES3 379 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 BCL7BQ9BQE9 202 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 GNB4Q9HAV0 340 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 CCDC59Q9P031 241 aaKnown RBP11.57□□□□□ -0.56
HDAC4-204ENST00000446876 ADAM30Q9UKF2 790 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 CEPT1Q9Y6K0 416 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 NOTCH3Q9UM47 2321 aa11.57□□□□□ -0.56
HDAC4-204ENST00000446876 CNIH1O95406 144 aa11.56□□□□□ -0.56
HDAC4-204ENST00000446876 IGLL1P15814 213 aa11.56□□□□□ -0.56
HDAC4-204ENST00000446876 RCVRNP35243 200 aa11.56□□□□□ -0.56
HDAC4-204ENST00000446876 UBE2KP61086 200 aa11.56□□□□□ -0.56
HDAC4-204ENST00000446876 KIAA0141Q14154 515 aaPredicted RBP11.56□□□□□ -0.56
HDAC4-204ENST00000446876 VMA21Q3ZAQ7 101 aa11.56□□□□□ -0.56
HDAC4-204ENST00000446876 TMEM65Q6PI78 240 aa11.56□□□□□ -0.56
HDAC4-204ENST00000446876 ZNF66Q6ZN08 573 aa11.56□□□□□ -0.56
HDAC4-204ENST00000446876 MRPL41Q8IXM3 137 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms