RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 COL6A6A6NMZ7 2263 aa11.31□□□□□ -0.6
RBM39-216ENST00000444878 SHISA9B4DS77 424 aa11.31□□□□□ -0.6
RBM39-216ENST00000444878 ITGB1BP1O14713 200 aa11.31□□□□□ -0.6
RBM39-216ENST00000444878 NFYBP25208 207 aa11.31□□□□□ -0.6
RBM39-216ENST00000444878 ARL16Q0P5N6 197 aa11.31□□□□□ -0.6
RBM39-216ENST00000444878 GUCA2BQ16661 112 aa11.31□□□□□ -0.6
RBM39-216ENST00000444878 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
RBM39-216ENST00000444878 SCGB1C1Q8TD33 95 aa11.31□□□□□ -0.6
RBM39-216ENST00000444878 R3HDM4Q96D70 268 aa11.31□□□□□ -0.6
RBM39-216ENST00000444878 CHTOPQ9Y3Y2 248 aaKnown RBP11.31□□□□□ -0.6
RBM39-216ENST00000444878 ZNF729A6NN14 1252 aaPredicted RBP11.3□□□□□ -0.6
RBM39-216ENST00000444878 E7EQL1 145 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 SLC31A2O15432 143 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 NUPL2O15504 423 aaKnown RBP11.3□□□□□ -0.6
RBM39-216ENST00000444878 HPRT1P00492 218 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 SFTA3P0C7M3 94 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 NDUFB7P17568 137 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 GUK1Q16774 197 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 AKR1C8PQ5T2L2 129 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 TCF23Q7RTU1 214 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 PUSL1Q8N0Z8 303 aaKnown RBP11.3□□□□□ -0.6
RBM39-216ENST00000444878 RNASE6Q93091 150 aaKnown RBP11.3□□□□□ -0.6
RBM39-216ENST00000444878 DYNLRB1Q9NP97 96 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 PRELID3BQ9Y3B1 194 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 TET2Q6N021 2002 aaPredicted RBP11.3□□□□□ -0.6
RBM39-216ENST00000444878 ANKHD1Q8IWZ3 2542 aaKnown RBP11.3□□□□□ -0.6
RBM39-216ENST00000444878 ABCA4P78363 2273 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 PPIAL4EA0A075B759 164 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 A0A1B0GV50 99 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 A0A1W2PPE3 182 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 FAM90A27PA6NNH2 459 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 PPIAL4DF5H284 164 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 CCL21O00585 134 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 TSPAN4O14817 238 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 PPIAL4FP0DN26 164 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 CT45A1Q5HYN5 189 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 HAPLN4Q86UW8 402 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 DMRTC2Q8IXT2 367 aaPredicted RBP11.3□□□□□ -0.6
RBM39-216ENST00000444878 ST6GALNAC3Q8NDV1 305 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 LFNGQ8NES3 379 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 CT45A3Q8NHU0 189 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 CCL17Q92583 94 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 NEUROG1Q92886 237 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 S1PR3Q99500 378 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 EIF5A2Q9GZV4 153 aaKnown RBP11.3□□□□□ -0.6
RBM39-216ENST00000444878 IDI2-AS1Q9NZ38 188 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 NDRG3Q9UGV2 375 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 PPIAL4AQ9Y536 164 aa11.3□□□□□ -0.6
RBM39-216ENST00000444878 TPRP12270 2363 aaKnown RBP11.3□□□□□ -0.6
RBM39-216ENST00000444878 LOC105371267A0A1B0GV96 52 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 hADV38S2A0JD32 116 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 TMEM178BH3BS89 294 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 CD3EP07766 207 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 PEA15Q15121 130 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 UTF1Q5T230 341 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 TMEM14EPQ6UXP3 125 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 ZNF525Q8N782 197 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 DTD1Q8TEA8 209 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 CORO2AQ92828 525 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 MS4A5Q9H3V2 200 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 SLC25A10Q9UBX3 287 aaPredicted RBP11.29□□□□□ -0.6
RBM39-216ENST00000444878 GAB2Q9UQC2 676 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 FBXO7Q9Y3I1 522 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 CHD8Q9HCK8 2581 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.29□□□□□ -0.6
RBM39-216ENST00000444878 C9JQL5 133 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 RBFOX2O43251 390 aaKnown RBP eCLIP11.29□□□□□ -0.63e-6■■□□□ 13
RBM39-216ENST00000444878 ZG16O60844 167 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 SNAPINO95295 136 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 CHRNB4P30926 498 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 ZNF273Q14593 569 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 OR8G2PQ6IF36 304 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 CLEC2AQ6UVW9 174 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 CIB3Q96Q77 187 aaPredicted RBP11.29□□□□□ -0.6
RBM39-216ENST00000444878 PBDC1Q9BVG4 233 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 TMEM106BQ9NUM4 274 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 NCOR2Q9Y618 2525 aa11.29□□□□□ -0.6
RBM39-216ENST00000444878 CEBPZOSA8MTT3 80 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 F12P00748 615 aaPredicted RBP11.28□□□□□ -0.6
RBM39-216ENST00000444878 PF4P02776 101 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 H2AFB1P0C5Y9 115 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 APOBEC3AP31941 199 aaPredicted RBP11.28□□□□□ -0.6
RBM39-216ENST00000444878 KIR2DS2P43631 304 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 ERVK-16P61578 105 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 SLC38A11Q08AI6 406 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 PRAMEF5Q5TYX0 476 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 ZNF600Q6ZNG1 722 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 SSX9Q7RTT3 188 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 LYG1Q8N1E2 194 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.28□□□□□ -0.6
RBM39-216ENST00000444878 LINC01560Q8TB33 94 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 ZDHHC16Q969W1 377 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 LINC00574Q9H8X3 128 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 LINC00312Q9Y6C7 94 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 RELNP78509 3460 aa11.28□□□□□ -0.6
RBM39-216ENST00000444878 SAA2-SAA4A0A096LPE2 208 aa11.27□□□□□ -0.6
RBM39-216ENST00000444878 FAM157AC9JC47 383 aa11.27□□□□□ -0.6
RBM39-216ENST00000444878 OR9G9P0C7N8 305 aa11.27□□□□□ -0.6
RBM39-216ENST00000444878 SAA2P0DJI9 122 aaPredicted RBP11.27□□□□□ -0.6
RBM39-216ENST00000444878 GNG10P50151 68 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms