RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 TRBV6-6A0A0A6YYG2 114 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGHV3-7P01780 117 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 ID3Q02535 119 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 PRB3Q04118 309 aaPredicted RBP6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 TMEM155Q4W5P6 130 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 MIDNQ504T8 468 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 AWAT1Q58HT5 328 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 TPRX1Q8N7U7 411 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 ABHD14AQ9BUJ0 271 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 NECAP2Q9NVZ3 263 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 ST3GAL6Q9Y274 331 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 FLNAP21333 2647 aaKnown RBP6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 ATRQ13535 2644 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 C7orf77A4D0Y5 90 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 HSD17B6O14756 317 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 CDS2O95674 445 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 SP6Q3SY56 376 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 HEPN1Q6WQI6 88 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 MOB3BQ86TA1 216 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 TMEM222Q9H0R3 208 aa6.11□□□□□ -1.43
CDC42BPA-208ENST00000442054 NBEAQ8NFP9 2946 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A10PA6NDY2 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A18PA6NE21 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A16PA6NEW6 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A20PA6NIJ5 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A8PA6NJQ4 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A7PA6NKC0 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A22PA8MWA6 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A12PA8MX19 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A5PA8MXJ8 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A23PA8MXZ1 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 HAND1O96004 215 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 KNG1P01042 644 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGHV2-70P01814 119 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A15PP0C7V4 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A13PP0C7W8 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A14PP0C7W9 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 FAM90A24PP0C7X0 464 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 PAX1P15863 534 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 S100GP29377 79 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 PPP1CCP36873 323 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 PRRX1P54821 245 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 HAGHQ16775 308 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 KRBOX4Q5JUW0 171 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 SELENOHQ8IZQ5 122 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 GAPTQ8N292 157 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 SLC35G3Q8N808 338 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 UBALD1Q8TB05 177 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 RTN4IP1Q8WWV3 396 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 METTL8Q9H825 291 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 SMCO4Q9NRQ5 59 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 HILPDAQ9Y5L2 63 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 KPTNQ9Y664 436 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 LAMA5O15230 3695 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 ITPR2Q14571 2701 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 NCBP2LA6PVI3 153 aaKnown RBP6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 TRDCB7Z8K6 153 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 OVOL3O00110 214 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 SYNGR1O43759 233 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 AADACP22760 399 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 NPBWR2P48146 333 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 PEA15Q15121 130 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 SSX2Q16385 188 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 C2CD4CQ8TF44 421 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 ABHD14BQ96IU4 210 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 PITPNC1Q9UKF7 332 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGKV1D-13A0A0B4J2D9 117 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 J3QLI3 93 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 MPPED1O15442 326 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 ST8SIA5O15466 376 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 MT-ND4LP03901 98 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 ARG1P05089 322 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGHV4-31P0DP07 118 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 IGKV1-13P0DP09 117 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 CD200P41217 278 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 CEBPDP49716 269 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 GNG10P50151 68 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 EWSR1Q01844 656 aaKnown RBP eCLIP6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 COL10A1Q03692 680 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 EIF4EBP1Q13541 118 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 HMGN3Q15651 99 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 GUK1Q16774 197 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 BRICD5Q6PL45 260 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 SGPP2Q8IWX5 399 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 SMDT1Q9H4I9 107 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 Q9N2K0 584 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 TREM1Q9NP99 234 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 C19orf12Q9NSK7 152 aa6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 LYRM2Q9NU23 88 aaPredicted RBP6.1□□□□□ -1.43
CDC42BPA-208ENST00000442054 A0A0G2JRQ6 117 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 SNRPEP62304 92 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 OSR2Q8N2R0 312 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR2S2Q9NQN1 319 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 ZNF355PQ9NSJ1 428 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 OR6C3Q9NZP0 311 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 C14orf166Q9Y224 244 aaKnown RBP6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 A0A1B0GWJ7 208 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 PDCD6O75340 191 aa6.09□□□□□ -1.43
CDC42BPA-208ENST00000442054 CLN5O75503 358 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms