RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 EGFEM1PQ0D2K5 195 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 MEF2DQ14814 521 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 KIR2DS1Q14954 304 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 KCNJ8Q15842 424 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 LTC4SQ16873 150 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 TRIM16LQ309B1 348 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 SCGB2B2Q4G0G5 96 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 LRRC10Q5BKY1 277 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 C6orf183Q5T699 404 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 PRAMEF5Q5TYX0 476 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 MZT2BQ6NZ67 158 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 DHRS11Q6UWP2 260 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 BRD3OSQ6XYD6 125 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 IDO2Q6ZQW0 420 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 BTN2A1Q7KYR7 527 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 H1FOOQ8IZA3 346 aaPredicted RBP3.82□□□□□ -1.8
PTPN4-206ENST00000441089 PRR18Q8N4B5 295 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 ARRDC1Q8N5I2 433 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 SPICQ8N5J4 248 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 LY6G5BQ8NDX9 201 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 OR8B3Q8NGG8 313 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 OR4A4PQ8NGN8 299 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 C8orf46Q8TAG6 207 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 ENKURQ8TC29 256 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 GATAD1Q8WUU5 269 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 CHAC2Q8WUX2 184 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 GIMAP1Q8WWP7 306 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 H1FXQ92522 213 aaKnown RBP3.82□□□□□ -1.8
PTPN4-206ENST00000441089 ARL11Q969Q4 196 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 TMEM230Q96A57 120 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 MOB3AQ96BX8 217 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 C5orf30Q96GV9 206 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 OR8B2Q96RD0 313 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 GINS4Q9BRT9 223 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF2Q9BSG1 426 aaPredicted RBP3.82□□□□□ -1.8
PTPN4-206ENST00000441089 MARVELD1Q9BSK0 173 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 TOLLIPQ9H0E2 274 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 C20orf85Q9H1P6 137 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 DPAGT1Q9H3H5 408 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 LINC00574Q9H8X3 128 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 MIOXQ9UGB7 285 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 GPR132Q9UNW8 380 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 VSIG4Q9Y279 399 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 SOX21Q9Y651 276 aaPredicted RBP3.82□□□□□ -1.8
PTPN4-206ENST00000441089 LINC00312Q9Y6C7 94 aa3.82□□□□□ -1.8
PTPN4-206ENST00000441089 hCG_2014768A0A024R1R8 64 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 TRAV6A0A075B6T7 132 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 TRGV10A0A0A0MS01 117 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 KBTBD11-OT1A0A1B0GTJ5 212 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 hADV38S2A0JD32 116 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 FUOMA2VDF0 154 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 FAM172BPA6NC97 362 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 BTBD17A6NE02 478 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF729A6NN14 1252 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 C17orf98A8MV24 154 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 INMT-MINDY4F8WBC2 141 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 RNASEK-C17orf49H0YIS7 233 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 F2RL2O00254 374 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 SPDEFO95238 335 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 DIRAS3O95661 229 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 IGLV2-14P01704 120 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 IGHV3-7P01780 117 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 IFNA6P05013 189 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 EGR2P11161 476 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ANXA7P20073 488 aaKnown RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 GZMHP20718 246 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 PPP1CCP36873 323 aaKnown RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF134P52741 427 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 FXYD4P59646 89 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 TSPAN5P62079 268 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 GNB2P62879 340 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 HTD2P86397 168 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 PRB3Q04118 309 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 MEF2CQ06413 473 aaPredicted RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 RBMS2Q15434 407 aaKnown RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 NSUN5P1Q3KNT7 163 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 MORN2Q502X0 79 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ESCO2Q56NI9 601 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ZFAND6Q6FIF0 208 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 HCP5Q6MZN7 132 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 TRAT1Q6PIZ9 186 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 PLET1Q6UQ28 207 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ADAMTSL5Q6ZMM2 481 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF554Q86TJ5 538 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 NDUFA11Q86Y39 141 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 FAM185AQ8N0U4 392 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 Q8N7P7 452 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 C11orf44Q8N8P7 122 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 MINDY2Q8NBR6 621 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ADAD2Q8NCV1 583 aaKnown RBP3.81□□□□□ -1.8
PTPN4-206ENST00000441089 ZNF439Q8NDP4 499 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 OR10V1Q8NGI7 309 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 TERB2Q8NHR7 220 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 MARCH1Q8TCQ1 289 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 CAPSLQ8WWF8 208 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 IL1F10Q8WWZ1 152 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 LEAP2Q969E1 77 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 GALMQ96C23 342 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 PRRT1Q99946 306 aa3.81□□□□□ -1.8
PTPN4-206ENST00000441089 SEC22CQ9BRL7 303 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms