RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 PAX5Q02548 391 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 LBHQ53QV2 105 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-205ENST00000438362 MRPL54Q6P161 138 aaKnown RBP5.67□□□□□ -1.5
CSDE1-205ENST00000438362 BHLHA15Q7RTS1 189 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-205ENST00000438362 C1QL4Q86Z23 238 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 KLF14Q8TD94 323 aaPredicted RBP5.67□□□□□ -1.5
CSDE1-205ENST00000438362 RNF2Q99496 336 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 GAL3ST2Q9H3Q3 398 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 IL19Q9UHD0 177 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 ZDHHC8Q9ULC8 765 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 MRPS18CQ9Y3D5 142 aaKnown RBP5.67□□□□□ -1.5
CSDE1-205ENST00000438362 ROS1P08922 2347 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 A0A1W2PPE3 182 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 C12orf77C9JDV5 145 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 NDUFB3O43676 98 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 SLC25A5P05141 298 aaKnown RBP5.67□□□□□ -1.5
CSDE1-205ENST00000438362 EGR1P18146 543 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 MPV17P39210 176 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 PAFAH1B2P68402 229 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 TMEM42Q69YG0 159 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 RNASEKQ6P5S7 137 aaKnown RBP5.67□□□□□ -1.5
CSDE1-205ENST00000438362 OR1L4Q8NGR5 311 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 SIGLEC12Q96PQ1 595 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF581Q9P0T4 197 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 ARL2-SNX15V9GYD0 113 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 IGHV3OR15-7A0A075B7D8 119 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 TRAV34A0A0B4J273 112 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 S100A7P31151 101 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 CAMPP49913 170 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 LRRC10Q5BKY1 277 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 NMSQ5H8A3 153 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 C10orf91Q5T1B1 145 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 SLC35E4Q6ICL7 350 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 SPNS3Q6ZMD2 512 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 TGIF2LYQ8IUE0 185 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 VSTM2AQ8TAG5 236 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 VN1R17PQ8TDU5 208 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 NAGKQ9UJ70 344 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 RFNGQ9Y644 331 aa5.67□□□□□ -1.5
CSDE1-205ENST00000438362 HIST1H1BP16401 226 aaKnown RBP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 ARL3P36405 182 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 FOXL2NBQ6ZUU3 175 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 SSX7Q7RTT5 188 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 LRP11Q86VZ4 500 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 LINC00469Q8N7U9 141 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 TMEM171Q8WVE6 324 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 NPCDR1Q9BY65 106 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 RNF7Q9UBF6 113 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 TRAV24A0A0B4J272 114 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 NAPSAO96009 420 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 CXCL1P09341 107 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 ARL14EPLP0DKL9 152 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF25P17030 456 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 USF1P22415 310 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 SSTR5P35346 364 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 LCN2P80188 198 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 HES1Q14469 280 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 RTP5Q14D33 572 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 VAMP3Q15836 100 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 SRSF7Q16629 238 aaKnown RBP eCLIP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 ETFRF1Q6IPR1 90 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 TIPARPQ7Z3E1 657 aaKnown RBP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 C1orf174Q8IYL3 243 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 MBD3L1Q8WWY6 194 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 STARD4Q96DR4 205 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 CDX2Q99626 313 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 HSPB9Q9BQS6 159 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 DEPPQ9NTK1 212 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 CBY1Q9Y3M2 126 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 TRAV1-1A0A0B4J248 108 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 WNT9BO14905 357 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 MT-ND6P03923 174 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 CEACAM1P13688 526 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 BRS3P32247 399 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 CSN1S1P47710 185 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 RPL23P62829 140 aaKnown RBP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 ZNF324BQ6AW86 544 aaPredicted RBP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 GGNQ86UU5 652 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 OR4X1Q8NH49 305 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 PLPPR1Q8TBJ4 325 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 ZDHHC16Q969W1 377 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 HARBI1Q96MB7 349 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 TMEM140Q9NV12 185 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 TCF19Q9Y242 345 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 OR51B2Q9Y5P1 312 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 MYO7BQ6PIF6 2116 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 A0A1B0GV90 55 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 A0A1W2PN81 502 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 C17orf98A8MV24 154 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 TMPRSS2O15393 492 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 CRYABP02511 175 aaKnown RBP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 ASCL4Q6XD76 172 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 Q6ZN92 141 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 ABHD12Q8N2K0 398 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 BLNKQ8WV28 456 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 MISP3Q96FF7 219 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 QTRT1Q9BXR0 403 aaKnown RBP5.66□□□□□ -1.5
CSDE1-205ENST00000438362 IL17BQ9UHF5 180 aa5.66□□□□□ -1.5
CSDE1-205ENST00000438362 K7ESF4 209 aa5.65□□□□□ -1.5
CSDE1-205ENST00000438362 ORM2P19652 201 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms