RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 GCH1P30793 250 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 TDGF1P3P51864 188 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 SRPXP78539 464 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 ZNF266Q14584 549 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 ZNF146Q15072 292 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 PYY3Q5JQD4 70 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 DOLPP1Q86YN1 238 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 LRRC29Q8WV35 223 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 SLC25A31Q9H0C2 315 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 RPRMQ9NS64 109 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 GNG13Q9P2W3 67 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 FAM208BQ5VWN6 2430 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 RBFOX3A6NFN3 312 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 LINC00473A8K010 186 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 IQCF6A8MYZ5 107 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.91□□□□□ -1.14
CUX1-206ENST00000437600 SOX15O60248 233 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 S1PR2O95136 353 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 PAX6P26367 422 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 EDDM3BP56851 147 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 SOHLH1Q5JUK2 328 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 AKR1C8PQ5T2L2 129 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 ZNF343Q6P1L6 599 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 ZNF880Q6PDB4 577 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 CD177Q8N6Q3 437 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 CYB561D1Q8N8Q1 229 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 C14orf144Q96I85 54 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 PARD6GQ9BYG4 376 aaPredicted RBP7.91□□□□□ -1.14
CUX1-206ENST00000437600 KCNIP1Q9NZI2 227 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 MMP24Q9Y5R2 645 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 SLC25A15Q9Y619 301 aa7.91□□□□□ -1.14
CUX1-206ENST00000437600 PITX3O75364 302 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 RAB4AP20338 218 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 RAB5CP51148 216 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 SLC35B3Q9H1N7 401 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 PRORYQ9H606 182 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 OPA3Q9H6K4 179 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 ZNF665Q9H7R5 613 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 RALYQ9UKM9 306 aaKnown RBP7.9□□□□□ -1.14
CUX1-206ENST00000437600 WSB1Q9Y6I7 421 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 A0A0G2JNJ9 132 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 CXorf65A6NEN9 183 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 P2RY6Q15077 328 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 ACP7Q6ZNF0 438 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 FAM57AQ8TBR7 257 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 OR4C12Q96R67 309 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 Q9UFV3 132 aa7.9□□□□□ -1.14
CUX1-206ENST00000437600 PLXNB1O43157 2135 aa7.9□□□□□ -1.15
CUX1-206ENST00000437600 ZG16O60844 167 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 S100A2P29034 98 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 RPL23AP62750 156 aaKnown RBP7.89□□□□□ -1.15
CUX1-206ENST00000437600 CABLES2Q9BTV7 478 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 CELSR2Q9HCU4 2923 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 DSCAMO60469 2012 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 UBE2L5PA0A1B0GUS4 154 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 PRRG2O14669 202 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 PROP1O75360 226 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 SULT1A1P50225 295 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 UBE2KP61086 200 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 ZNF718Q3SXZ3 478 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 NINJ1Q92982 152 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 MUCL1Q96DR8 90 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 MBNL3Q9NUK0 354 aaKnown RBP7.89□□□□□ -1.15
CUX1-206ENST00000437600 ZNRD1Q9P1U0 126 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 KPTNQ9Y664 436 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 A0A1B0GU03 582 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 CLEC18AA5D8T8 446 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 IFNA5P01569 189 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 PRDX2P32119 198 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 ZNF134P52741 427 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 KIAA0141Q14154 515 aaPredicted RBP7.89□□□□□ -1.15
CUX1-206ENST00000437600 SRSF7Q16629 238 aaKnown RBP eCLIP7.89□□□□□ -1.151e-8■■■■■ 28.4
CUX1-206ENST00000437600 RPL39P5Q59GN2 51 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 NCR3LG1Q68D85 454 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 MOGAT3Q86VF5 341 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 CLEC18CQ8NCF0 446 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 ATP5SQ99766 215 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 GFOD1Q9NXC2 390 aa7.89□□□□□ -1.15
CUX1-206ENST00000437600 TMEM30CPA0ZSE6 113 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 H3BQ15 152 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 IGLV1-44P01699 117 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 PRB1P04280 392 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 CCKARP32238 428 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 NDUFA6P56556 154 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 RAB11AP62491 216 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 ZNF726P1Q15940 193 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 CLEC12BQ2HXU8 276 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 C1orf229Q6ZS94 237 aaPredicted RBP7.88□□□□□ -1.15
CUX1-206ENST00000437600 WFDC8Q8IUA0 241 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 TGIF2LXQ8IUE1 241 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 C1orf162Q8NEQ5 155 aaPredicted RBP7.88□□□□□ -1.15
CUX1-206ENST00000437600 SCGB1C1Q8TD33 95 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 OR2V2Q96R30 315 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 RBKSQ9H477 322 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 IGKV1D-17A0A075B6S4 117 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 TRBV6-6A0A0A6YYG2 114 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 ODAMA1E959 279 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 A8MXE2 369 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 HSBP1L1C9JCN9 74 aa7.88□□□□□ -1.15
CUX1-206ENST00000437600 CRYAAP02489 173 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms