RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 ANKRD7Q92527 254 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 IMP4Q96G21 291 aaKnown RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 RNF170Q96K19 258 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 CYTH2Q99418 400 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 TMED9Q9BVK6 235 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 BEX2Q9BXY8 128 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 MS4A8Q9BY19 250 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 ANGPTL4Q9BY76 406 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 TRIM45Q9H8W5 580 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 DAZ1Q9NQZ3 744 aaKnown RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 INIPQ9NRY2 104 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 CA10Q9NS85 328 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 TAS2R1Q9NYW7 299 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 PRO0628Q9UI54 55 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 AP3M1Q9Y2T2 418 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 ORC6Q9Y5N6 252 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 SLC22A7Q9Y694 548 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 DYNC1H1Q14204 4646 aaKnown RBP1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 CADP27708 2225 aa1.36□□□□□ -2.19
HMGB1P31-201ENST00000437242 WNK1Q9H4A3 2382 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 IGKV3D-11A0A0A0MRZ8 115 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 TRGV5A0A0B4J1U4 118 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 FAM240AA0A1B0GVK7 77 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 LOC285095A0A1B0GVY8 99 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 SLC5A10A0PJK1 596 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 GMNCA6NCL1 334 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 IZUMO1RA6ND01 250 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 SIGLEC16A6NMB1 481 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 M0R1B8 84 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 PRMT5O14744 637 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 PLXNB1O43157 2135 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 PTTG1O95997 202 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 CLPSP04118 112 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 GYPCP04921 128 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 INAFM2P0DMQ5 153 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 UCHL3P15374 230 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 CD9P21926 228 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 CRYGSP22914 178 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 MSNP26038 577 aaKnown RBP1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 CCR7P32248 378 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 UGT2B10P36537 528 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 SLC18A1P54219 525 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR4D2P58180 307 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 ACTG1P63261 375 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 TPM4P67936 248 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 PLGLB1Q02325 96 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 VAMP3Q15836 100 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 EXOC3L4Q17RC7 722 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 ATP6AP1LQ52LC2 224 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 EPGNQ6UW88 154 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 SBSNQ6UWP8 590 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 CLEC19AQ6UXS0 136 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 TMEM136Q6ZRR5 245 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 FAM231DQ6ZW35 169 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 GLT6D1Q7Z4J2 308 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 RPS19BP1Q86WX3 136 aaKnown RBP1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 PHF13Q86YI8 300 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 SGPP2Q8IWX5 399 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 FAM58AQ8N1B3 248 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 CYP4Z2PQ8N1L4 340 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 ZDHHC22Q8N966 263 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR8K1Q8NGG5 319 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR5H2Q8NGV7 314 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR51Q1Q8NH59 317 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 YIPF6Q96EC8 236 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 RILPQ96NA2 401 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 NAP1L5Q96NT1 182 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 SPACA5Q96QH8 159 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 UGT2B28Q9BY64 529 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 MRPL20Q9BYC9 149 aaKnown RBP1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 HAUS4Q9H6D7 363 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 SND1-IT1Q9HBX3 110 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 ABCB9Q9NP78 766 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 NXT1Q9UKK6 140 aaKnown RBP1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 ACOT9Q9Y305 439 aa1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 BZW2Q9Y6E2 419 aaKnown RBP1.35□□□□□ -2.19
HMGB1P31-201ENST00000437242 MDFIC2A0A1B0GVS7 189 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 DPRXA6NFQ7 191 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 LYNX1G3V0Z9 82 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 UBFD1O14562 309 aaKnown RBP1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 TCF21O43680 179 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 MYO1DO94832 1006 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 KCNK2O95069 426 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 VAPBO95292 243 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 EPPINO95925 133 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 NRASP01111 189 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 HRASP01112 189 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 KRASP01116 189 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 TPM1P09493 284 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 OR5AC1P0C628 307 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 LYNX1P0DP58 116 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 BGNP21810 368 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 TGFBR1P36897 503 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 HSPA9P38646 679 aaKnown RBP1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 GPR4P46093 362 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 MARCKSL1P49006 195 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 DYNLT1P63172 113 aa1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 PAFAH1B3Q15102 231 aaKnown RBP1.34□□□□□ -2.19
HMGB1P31-201ENST00000437242 PMVKQ15126 192 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms