RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 CLEC18AA5D8T8 446 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 TSPAN2O60636 221 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 COL8A2P25067 703 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 TSPOP30536 169 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 FOXC1Q12948 553 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 ALKBH6Q3KRA9 238 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 MKXQ8IYA7 352 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 CLEC18CQ8NCF0 446 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 MTCH1Q9NZJ7 389 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 SH2D7A6NKC9 451 aaPredicted RBP6.35□□□□□ -1.39
CPSF6-202ENST00000435070 PDCD6O75340 191 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 GLB1P16278 677 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 RAB40CQ96S21 281 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 LRFN3Q9BTN0 628 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 DEFB127Q9H1M4 99 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 KIAA0100Q14667 2235 aaKnown RBP6.35□□□□□ -1.39
CPSF6-202ENST00000435070 IGHV3-15A0A0B4J1V0 119 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 LIPT2A6NK58 231 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 M0R1B8 84 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 EFNA2O43921 213 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF253O75346 499 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 UCP1P25874 307 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 CEBPDP49716 269 aaPredicted RBP6.35□□□□□ -1.39
CPSF6-202ENST00000435070 TBC1D28Q2M2D7 210 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 CENPVQ7Z7K6 275 aaPredicted RBP6.35□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF721Q8TF20 911 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 OR5P3Q8WZ94 311 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 PKIBQ9C010 78 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 TNFRSF19Q9NS68 423 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 CLN8Q9UBY8 286 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 NAT8BQ9UHF3 227 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 DPRXA6NFQ7 191 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 NRASP01111 189 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 KRASP01116 189 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 GFRA1P56159 465 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 OR1D5P58170 312 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 EDDM3AQ14507 147 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 Q56UQ5 140 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 TRAV38-1A0A0B4J264 116 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 A0A1W2PRS3 328 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 LRRC30A6NM36 301 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 PGLYRP1O75594 196 aaPredicted RBP6.35□□□□□ -1.39
CPSF6-202ENST00000435070 GPX1P07203 203 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 IFI6P09912 130 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 HLA-DRB5Q30154 266 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 OR10G8Q8NGN5 311 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 ZDHHC16Q969W1 377 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 RCHY1Q96PM5 261 aa6.35□□□□□ -1.39
CPSF6-202ENST00000435070 ABCA7Q8IZY2 2146 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 IGHV2-70DA0A0C4DH43 119 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 CTXND1A0A1B0GTU2 59 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 C3orf79P0CE67 100 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 CCL1P22362 96 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 GFERP55789 205 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 TFF3Q07654 80 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 MRPL43Q8N983 215 aaKnown RBP6.34□□□□□ -1.39
CPSF6-202ENST00000435070 TRIB1Q96RU8 372 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 CSTL1Q9H114 145 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 IL36RNQ9UBH0 155 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 C17orf112F2Z3M2 114 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 TSPAN13O95857 204 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 FAM162BQ5T6X4 162 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 TMEM144Q7Z5S9 345 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 C10orf126Q8N4M7 172 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 OR5B3Q8NH48 314 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 HS3ST1O14792 307 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 AREGP15514 252 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 DEFB109BQ30KR1 87 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 DEFB123Q8N688 67 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 ZNF576Q9H609 170 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 KIR2DS5A0A0G2JLQ3 304 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 A0A0G2JNG1 304 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 OR2T8A6NH00 312 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 KIR2DS3K7RE56 304 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 CT45A6P0DMU7 189 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 CT45A5P0DMU8 189 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 CT45A7P0DMV0 189 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 OTX1P32242 354 aaPredicted RBP6.34□□□□□ -1.39
CPSF6-202ENST00000435070 UQCRFS1P47985 274 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 KIR2DS5Q14953 304 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 PDLIM3Q53GG5 364 aaPredicted RBP6.34□□□□□ -1.39
CPSF6-202ENST00000435070 CT45A1Q5HYN5 189 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 AMMECR1LQ6DCA0 310 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 TCTEX1D1Q8N7M0 179 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 CT45A3Q8NHU0 189 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 HS3ST6Q96QI5 342 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 MEGF9Q9H1U4 602 aa6.34□□□□□ -1.39
CPSF6-202ENST00000435070 TRBV20OR9-2A0A075B6H5 130 aa6.34□□□□□ -1.4
CPSF6-202ENST00000435070 SERTM2A0A1B0GWG4 89 aa6.34□□□□□ -1.4
CPSF6-202ENST00000435070 CTRLP40313 264 aa6.34□□□□□ -1.4
CPSF6-202ENST00000435070 PLP1P60201 277 aa6.34□□□□□ -1.4
CPSF6-202ENST00000435070 AAED1Q7RTV5 226 aa6.34□□□□□ -1.4
CPSF6-202ENST00000435070 OR8I2Q8N0Y5 310 aa6.34□□□□□ -1.4
CPSF6-202ENST00000435070 IL19Q9UHD0 177 aa6.34□□□□□ -1.4
CPSF6-202ENST00000435070 WASHC3Q9Y3C0 194 aa6.34□□□□□ -1.4
CPSF6-202ENST00000435070 WDR1O75083 606 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 SAP30O75446 220 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 CXCL10P02778 98 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 IGKV3-11P04433 115 aa6.33□□□□□ -1.4
CPSF6-202ENST00000435070 RBM11P57052 281 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms