RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 UBE2G1P62253 170 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 LIN7CQ9NUP9 197 aaKnown RBP13.55□□□□□ -0.24
C9orf3-206ENST00000428313 PLEK2Q9NYT0 353 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 ZNF391Q9UJN7 358 aa13.55□□□□□ -0.24
C9orf3-206ENST00000428313 LGALS7P47929 136 aa13.54□□□□□ -0.24
C9orf3-206ENST00000428313 DUSP3P51452 185 aaPredicted RBP13.54□□□□□ -0.24
C9orf3-206ENST00000428313 SFTPA2Q8IWL1 248 aa13.54□□□□□ -0.24
C9orf3-206ENST00000428313 SLC25A40Q8TBP6 338 aa13.54□□□□□ -0.24
C9orf3-206ENST00000428313 SHISA8B8ZZ34 492 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 KIAA1644Q3SXP7 199 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 C11orf52Q96A22 123 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 SARAFQ96BY9 339 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 GPR27Q9NS67 375 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 SMPXQ9UHP9 88 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 TRGV10A0A0A0MS01 117 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 MUC21A0A0G2JKD1 596 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 MUC21A0A140T8X8 626 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 C2orf72A6NCS6 295 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 GJE1A6NN92 205 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 HLA-DRB1P01911 266 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 MNX1P50219 401 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-206ENST00000428313 RSPO4Q2I0M5 234 aaPredicted RBP13.53□□□□□ -0.24
C9orf3-206ENST00000428313 Q56UQ5 140 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 MUC21Q5SSG8 566 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 SAMD13Q5VXD3 122 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 TMEM54Q969K7 222 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 CLDN23Q96B33 292 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 C1RLQ9NZP8 487 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 C2orf16Q68DN1 1984 aa13.53□□□□□ -0.24
C9orf3-206ENST00000428313 TRBV6-6A0A0A6YYG2 114 aa13.52□□□□□ -0.24
C9orf3-206ENST00000428313 A0A1W2PPV4 95 aa13.52□□□□□ -0.24
C9orf3-206ENST00000428313 AHRRA9YTQ3 701 aa13.52□□□□□ -0.24
C9orf3-206ENST00000428313 RUNX3Q13761 415 aa13.52□□□□□ -0.24
C9orf3-206ENST00000428313 ZNF585BQ52M93 769 aa13.52□□□□□ -0.24
C9orf3-206ENST00000428313 PHYHD1Q5SRE7 291 aa13.52□□□□□ -0.24
C9orf3-206ENST00000428313 EBLN2Q6P2I7 272 aa13.52□□□□□ -0.24
C9orf3-206ENST00000428313 ZNF611Q8N823 705 aa13.52□□□□□ -0.24
C9orf3-206ENST00000428313 EAF1Q96JC9 268 aaPredicted RBP13.52□□□□□ -0.24
C9orf3-206ENST00000428313 BRCA2P51587 3418 aa13.52□□□□□ -0.24
C9orf3-206ENST00000428313 TRAV8-6A0A0B4J262 113 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 CGAP01215 116 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 DEFA4P12838 97 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 REG1BP48304 166 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 HHEXQ03014 270 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 PSG3Q16557 428 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 ZNF718Q3SXZ3 478 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 UFSP1Q6NVU6 142 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 C18orf32Q8TCD1 76 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 TMEM186Q96B77 213 aa13.52□□□□□ -0.25
C9orf3-206ENST00000428313 TMEM265A0A087WTH1 108 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 C2orf70A6NJV1 201 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 NPIPB11E5RHQ5 1161 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 CXorf1O96002 111 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 CELA3BP08861 270 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 PLCXD3Q63HM9 321 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 SLC25A34Q6PIV7 304 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 WFDC8Q8IUA0 241 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 Q8N7P7 452 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 OR1B1Q8NGR6 318 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 ERRFI1Q9UJM3 462 aaPredicted RBP13.51□□□□□ -0.25
C9orf3-206ENST00000428313 CDIPTO14735 213 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 STAG3L2P0CL84 134 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 STAG3L3P0CL85 134 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 ATXN8OSP0DMR3 200 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 GTF2H5Q6ZYL4 71 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 OR2Y1Q8NGV0 311 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 COMMD5Q9GZQ3 224 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 RP1P56715 2156 aa13.51□□□□□ -0.25
C9orf3-206ENST00000428313 TRAV38-1A0A0B4J264 116 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 A0A1W2PNR3 127 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 HSBP1O75506 76 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 APCSP02743 223 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 CPT1CQ8TCG5 803 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 LRRC61Q9BV99 259 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 ULBP2Q9BZM5 246 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 OR51B2Q9Y5P1 312 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 GAGE10A6NGK3 116 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 M0R2Z0 102 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 IGLV2-14P01704 120 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 FGF12P61328 243 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 YPEL5P62699 121 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 RPL31P62899 125 aaKnown RBP13.5□□□□□ -0.25
C9orf3-206ENST00000428313 KLF5Q13887 457 aaPredicted RBP13.5□□□□□ -0.25
C9orf3-206ENST00000428313 OR5A2Q8NGI9 324 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 OSTCQ9NRP0 149 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 WDR83OSQ9Y284 106 aa13.5□□□□□ -0.25
C9orf3-206ENST00000428313 KMT2EQ8IZD2 1858 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 hCG_38984A0A1B0GV85 526 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 CRXO43186 299 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-206ENST00000428313 DHHO43323 396 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 SYNGR3O43761 229 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 ARL14EPLP0DKL9 152 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 NPY1RP25929 384 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 PTGDSP41222 190 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 GPR6P46095 362 aaPredicted RBP13.49□□□□□ -0.25
C9orf3-206ENST00000428313 CCL7P80098 99 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 PRAMEF20Q5VT98 475 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 LMX1AQ8TE12 382 aa13.49□□□□□ -0.25
C9orf3-206ENST00000428313 RNF138Q8WVD3 245 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms