RNA–Protein interactions for RNA: ENST00000428120.5

FAAP20-209, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 2,313 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-209ENST00000428120 S1PR3Q99500 378 aa19.08■□□□□ 0.65
FAAP20-209ENST00000428120 RPUSD1Q9UJJ7 312 aaKnown RBP19.08■□□□□ 0.65
FAAP20-209ENST00000428120 OR9G9P0C7N8 305 aa19.08■□□□□ 0.64
FAAP20-209ENST00000428120 TMEM200BQ69YZ2 307 aa19.08■□□□□ 0.64
FAAP20-209ENST00000428120 UQCC3Q6UW78 93 aa19.08■□□□□ 0.64
FAAP20-209ENST00000428120 SREK1IP1Q8N9Q2 155 aaPredicted RBP19.08■□□□□ 0.64
FAAP20-209ENST00000428120 LINC00574Q9H8X3 128 aa19.08■□□□□ 0.64
FAAP20-209ENST00000428120 TMA7Q9Y2S6 64 aaKnown RBP19.08■□□□□ 0.64
FAAP20-209ENST00000428120 ACACBO00763 2458 aa19.08■□□□□ 0.64
FAAP20-209ENST00000428120 TNFRSF13BO14836 293 aaPredicted RBP19.07■□□□□ 0.64
FAAP20-209ENST00000428120 NDUFB3O43676 98 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 F2RL1P55085 397 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 MRPS11P82912 194 aaKnown RBP19.07■□□□□ 0.64
FAAP20-209ENST00000428120 IL34Q6ZMJ4 242 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 ZNF251Q9BRH9 671 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 PRELID3BQ9Y3B1 194 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 A0A1B0GV50 99 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 DVL1O14640 695 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 ITGB1BP1O14713 200 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 ZG16O60844 167 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 HPRT1P00492 218 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 SFTPCP11686 197 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 TFF3Q07654 80 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 FAM216AQ8WUB2 273 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 TREM1Q9NP99 234 aa19.07■□□□□ 0.64
FAAP20-209ENST00000428120 RPS16P62249 146 aaKnown RBP19.06■□□□□ 0.64
FAAP20-209ENST00000428120 HFEQ30201 348 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 LRRC10Q5BKY1 277 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 FAM213BQ8TBF2 198 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 ZNF714Q96N38 554 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 QTRT1Q9BXR0 403 aaKnown RBP19.06■□□□□ 0.64
FAAP20-209ENST00000428120 NUP50Q9UKX7 468 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 LOXP28300 417 aaPredicted RBP19.06■□□□□ 0.64
FAAP20-209ENST00000428120 OR8G2PQ6IF36 304 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 SLC25A24Q6NUK1 477 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 DDB2Q92466 427 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 GAL3ST2Q9H3Q3 398 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 TACC2O95359 2948 aa19.06■□□□□ 0.64
FAAP20-209ENST00000428120 COL8A2P25067 703 aa19.05■□□□□ 0.64
FAAP20-209ENST00000428120 TAS2R30P59541 319 aa19.05■□□□□ 0.64
FAAP20-209ENST00000428120 TMEM218A2RU14 115 aa19.05■□□□□ 0.64
FAAP20-209ENST00000428120 DEFA5Q01523 94 aa19.05■□□□□ 0.64
FAAP20-209ENST00000428120 MEF2CQ06413 473 aaPredicted RBP19.05■□□□□ 0.64
FAAP20-209ENST00000428120 ZNF383Q8NA42 475 aa19.05■□□□□ 0.64
FAAP20-209ENST00000428120 DTD1Q8TEA8 209 aa19.05■□□□□ 0.64
FAAP20-209ENST00000428120 NUDT19A8MXV4 375 aa19.04■□□□□ 0.64
FAAP20-209ENST00000428120 DFFBO76075 338 aa19.04■□□□□ 0.64
FAAP20-209ENST00000428120 TSPAN15O95858 294 aa19.04■□□□□ 0.64
FAAP20-209ENST00000428120 ADCYAP1P18509 176 aa19.04■□□□□ 0.64
FAAP20-209ENST00000428120 UQCRFS1P47985 274 aa19.04■□□□□ 0.64
FAAP20-209ENST00000428120 SLC25A48Q6ZT89 311 aaKnown RBP19.04■□□□□ 0.64
FAAP20-209ENST00000428120 LILRB2Q8N423 598 aa19.04■□□□□ 0.64
FAAP20-209ENST00000428120 OR4C12Q96R67 309 aa19.04■□□□□ 0.64
FAAP20-209ENST00000428120 CFAP46Q8IYW2 2715 aa19.04■□□□□ 0.64
FAAP20-209ENST00000428120 TRAV3A0A0B4J244 114 aa19.03■□□□□ 0.64
FAAP20-209ENST00000428120 ATRAIDQ6UW56 229 aa19.03■□□□□ 0.64
FAAP20-209ENST00000428120 THNSL2Q86YJ6 484 aa19.03■□□□□ 0.64
FAAP20-209ENST00000428120 CEBPZOSA8MTT3 80 aa19.03■□□□□ 0.64
FAAP20-209ENST00000428120 IFNA5P01569 189 aa19.03■□□□□ 0.64
FAAP20-209ENST00000428120 TAGLNQ01995 201 aaKnown RBP19.03■□□□□ 0.64
FAAP20-209ENST00000428120 ZNF525Q8N782 197 aa19.03■□□□□ 0.64
FAAP20-209ENST00000428120 LYPD6BQ8NI32 183 aa19.03■□□□□ 0.64
FAAP20-209ENST00000428120 GAB2Q9UQC2 676 aa19.03■□□□□ 0.64
FAAP20-209ENST00000428120 FBXO7Q9Y3I1 522 aa19.03■□□□□ 0.64
FAAP20-209ENST00000428120 MALRD1Q5VYJ5 2156 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 RBFOX2O43251 390 aaKnown RBP eCLIP19.02■□□□□ 0.647e-8■□□□□ 8.8
FAAP20-209ENST00000428120 LY6HO94772 140 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 RAB5CP51148 216 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 HBG1P69891 147 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 HBG2P69892 147 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 TMEM14EPQ6UXP3 125 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.02■□□□□ 0.64
FAAP20-209ENST00000428120 GNPNAT1Q96EK6 184 aaPredicted RBP19.02■□□□□ 0.64
FAAP20-209ENST00000428120 TSNAXQ99598 290 aaKnown RBP19.02■□□□□ 0.64
FAAP20-209ENST00000428120 TMEM204Q9BSN7 226 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 RSG1Q9BU20 258 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 IFNA17P01571 189 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 NQO2P16083 231 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 ERVK-16P61578 105 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 HEPN1Q6WQI6 88 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 OR4S2Q8NH73 311 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 TMEM140Q9NV12 185 aa19.02■□□□□ 0.64
FAAP20-209ENST00000428120 STRAPQ9Y3F4 350 aaKnown RBP19.02■□□□□ 0.64
FAAP20-209ENST00000428120 OR4A16Q8NH70 328 aa19.01■□□□□ 0.63
FAAP20-209ENST00000428120 UQCC1Q9NVA1 299 aa19.01■□□□□ 0.63
FAAP20-209ENST00000428120 F12P00748 615 aaPredicted RBP19.01■□□□□ 0.63
FAAP20-209ENST00000428120 SLC38A11Q08AI6 406 aa19.01■□□□□ 0.63
FAAP20-209ENST00000428120 HNF4GQ14541 408 aa19.01■□□□□ 0.63
FAAP20-209ENST00000428120 KAAG1Q9UBP8 84 aa19.01■□□□□ 0.63
FAAP20-209ENST00000428120 RALYQ9UKM9 306 aaKnown RBP19.01■□□□□ 0.63
FAAP20-209ENST00000428120 DAOP14920 347 aa19■□□□□ 0.63
FAAP20-209ENST00000428120 KIR2DS2P43631 304 aa19■□□□□ 0.63
FAAP20-209ENST00000428120 THBS3P49746 956 aa19■□□□□ 0.63
FAAP20-209ENST00000428120 TMEM30BQ3MIR4 351 aa19■□□□□ 0.63
FAAP20-209ENST00000428120 SPTAN1Q13813 2472 aaKnown RBP19■□□□□ 0.63
FAAP20-209ENST00000428120 TET2Q6N021 2002 aaPredicted RBP19■□□□□ 0.63
FAAP20-209ENST00000428120 C9JQL5 133 aa19■□□□□ 0.63
FAAP20-209ENST00000428120 RNASEK-C17orf49H0YIS7 233 aa19■□□□□ 0.63
FAAP20-209ENST00000428120 BTN1A1Q13410 526 aa19■□□□□ 0.63
FAAP20-209ENST00000428120 AVPI1Q5T686 147 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms