RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 C9orf152Q5JTZ5 239 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 GPR107Q5VW38 600 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 MZT2AQ6P582 158 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 OR5H6Q8NGV6 325 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 CD300LFQ8TDQ1 290 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 RAB2BQ8WUD1 216 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 HSPB9Q9BQS6 159 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 KLK9Q9UKQ9 250 aa7.16□□□□□ -1.26
SMC1A-203ENST00000428014 RBMX2Q9Y388 322 aaKnown RBP7.16□□□□□ -1.26
SMC1A-203ENST00000428014 TRAV18A0A075B6X5 111 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 IGKV1D-8A0A087WSZ0 117 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 TRAV41A0A0B4J266 112 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 FAM229AH3BQW9 127 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 H7C2Y5 167 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF701M0R085 212 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-203ENST00000428014 M0R1X1 148 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 NOL3O60936 208 aaKnown RBP7.15□□□□□ -1.26
SMC1A-203ENST00000428014 IGLV2-23P01705 113 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 IGKV1-16P04430 117 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF182P17025 639 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-203ENST00000428014 AADACP22760 399 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 CD40LGP29965 261 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 PRSS3P35030 304 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 MAS1LP35410 378 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 INSL3P51460 131 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 MRPS10P82664 201 aaKnown RBP7.15□□□□□ -1.26
SMC1A-203ENST00000428014 EGFEM1PQ0D2K5 195 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 BEAN1Q3B7T3 259 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 VMA21Q3ZAQ7 101 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 TMEM69Q5SWH9 247 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 LINC00482Q8N8I6 264 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 GPX8Q8TED1 209 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 NUDCD2Q8WVJ2 157 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 CYYR1Q96J86 154 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 ST6GALNAC5Q9BVH7 336 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 RNF167Q9H6Y7 350 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 ZNF230Q9UIE0 474 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-203ENST00000428014 FOXA2Q9Y261 457 aaPredicted RBP7.15□□□□□ -1.26
SMC1A-203ENST00000428014 VSIG4Q9Y279 399 aa7.15□□□□□ -1.26
SMC1A-203ENST00000428014 RBM7Q9Y580 266 aaKnown RBP7.15□□□□□ -1.26
SMC1A-203ENST00000428014 A0A075B6Q4 140 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 TMEM238LA0A1B0GVL6 79 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 ATP6V0E1O15342 81 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 PPYP01298 95 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 IGLV2-14P01704 120 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 PF4P02776 101 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 RPS16P62249 146 aaKnown RBP7.14□□□□□ -1.27
SMC1A-203ENST00000428014 CATR1Q13166 79 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 DYRK1AQ13627 763 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 KIAA0141Q14154 515 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-203ENST00000428014 CDK10Q15131 360 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 PDLIM3Q53GG5 364 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-203ENST00000428014 ACTBL2Q562R1 376 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 THOC7Q6I9Y2 204 aaKnown RBP7.14□□□□□ -1.27
SMC1A-203ENST00000428014 LPCAT3Q6P1A2 487 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 CLVS1Q8IUQ0 354 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-203ENST00000428014 SAMD12Q8N8I0 201 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 BVESQ8NE79 360 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 OR4S2Q8NH73 311 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 OR4A5Q8NH83 315 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 FAM110DQ8TAY7 271 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-203ENST00000428014 HARBI1Q96MB7 349 aa7.14□□□□□ -1.27
SMC1A-203ENST00000428014 NOL4LQ96MY1 436 aaPredicted RBP7.14□□□□□ -1.27
SMC1A-203ENST00000428014 SRSF8Q9BRL6 282 aaKnown RBP7.14□□□□□ -1.27
SMC1A-203ENST00000428014 METTL1Q9UBP6 276 aaKnown RBP7.14□□□□□ -1.27
SMC1A-203ENST00000428014 A0A0G2JLM5 398 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 LINC01548A6NM66 108 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 I3L521 148 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 SHOXO15266 292 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 HRASP01112 189 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 OR8U8P0C7N1 319 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 EGR2P11161 476 aaPredicted RBP7.13□□□□□ -1.27
SMC1A-203ENST00000428014 RCVRNP35243 200 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 RAB9AP51151 201 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 UCP3P55916 312 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 TAS2R20P59543 309 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 NCS1P62166 190 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 PLGLAQ15195 96 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 NSUN5P1Q3KNT7 163 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 VAX1Q5SQQ9 334 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 TMEM65Q6PI78 240 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 ETV3LQ6ZN32 361 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 KCTD9Q7L273 389 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 C5orf24Q7Z6I8 188 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 ZNF329Q86UD4 541 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 SLC25A42Q86VD7 318 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 MRPL41Q8IXM3 137 aaKnown RBP7.13□□□□□ -1.27
SMC1A-203ENST00000428014 MMD2Q8IY49 270 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 ZNF491Q8N8L2 437 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 C11orf44Q8N8P7 122 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 DEDD2Q8WXF8 326 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 ARPC1AQ92747 370 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 SNAPC3Q92966 411 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 MOB3AQ96BX8 217 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 USMG5Q96IX5 58 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 RITA1Q96K30 269 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 RBM38Q9H0Z9 239 aaKnown RBP7.13□□□□□ -1.27
SMC1A-203ENST00000428014 FBXL15Q9H469 300 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 COMMD9Q9P000 198 aa7.13□□□□□ -1.27
SMC1A-203ENST00000428014 ELF5Q9UKW6 265 aaPredicted RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms