RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 LINC01587Q99440 93 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 TRAF4Q9BUZ4 470 aaPredicted RBP8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 NAT8Q9UHE5 227 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 TRBV5-3A0A0A0MS03 114 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 TCF21O43680 179 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 WISP3O95389 354 aaPredicted RBP8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 HINT1P49773 126 aaPredicted RBP8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 WDFY1Q8IWB7 410 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 OR4D11Q8NGI4 311 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 MAP1LC3CQ9BXW4 147 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 STAG3L2P0CL84 134 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 CD33P20138 364 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 ANOS1P23352 680 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 TMEM88Q6PEY1 159 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 C20orf204Q6ZNR8 217 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 MRPL24Q96A35 216 aaKnown RBP8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 VGLL1Q99990 258 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 CHRNA10Q9GZZ6 450 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 BET1LQ9NYM9 111 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 SRD5A1P18405 259 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 GPR82Q96P67 336 aa8.51□□□□□ -1.05
CLTCL1-202ENST00000427926 C9JCJ5 164 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 PAGE4O60829 102 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 IGHV3-11P01762 117 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 IGHV3-23P01764 117 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 MYOD1P15172 320 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 BTF3P20290 206 aaKnown RBP8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 SSTR5P35346 364 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 LYZL2Q7Z4W2 148 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 OR8A1Q8NGG7 326 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 C17orf51A8MQB3 221 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 GLIPR1P48060 266 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 SNRPEP62304 92 aaKnown RBP8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 TMEM191AQ9H0A3 160 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 DSPPQ9NZW4 1301 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 CENPVL1A0A0U1RR11 272 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 PSMB11A5LHX3 300 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 CD59P13987 128 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 BSXQ3C1V8 233 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 SGK494Q96LW2 274 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 SLC35B3Q9H1N7 401 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 DLL3Q9NYJ7 618 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 FBXL7Q9UJT9 491 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 PXMP4Q9Y6I8 212 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 ANKRD20A5PA0PJZ0 165 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 AP4M1O00189 453 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 DLX6P56179 175 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 ZNRF1Q8ND25 227 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 OR5AU1Q8NGC0 362 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 LINC00470Q9BZP3 86 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 SVILO95425 2214 aa8.5□□□□□ -1.05
CLTCL1-202ENST00000427926 IGHV3-49A0A0A0MS15 119 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 LOC389332A0A1B0GUA5 103 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A10PA6NDY2 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A18PA6NE21 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A16PA6NEW6 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A20PA6NIJ5 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A8PA6NJQ4 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A7PA6NKC0 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A22PA8MWA6 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A12PA8MX19 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A5PA8MXJ8 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A23PA8MXZ1 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 ZNF253O75346 499 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A15PP0C7V4 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A13PP0C7W8 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A14PP0C7W9 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 FAM90A24PP0C7X0 464 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 STAG3L3P0CL85 134 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 REC114Q7Z4M0 266 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 C9orf106Q8NAJ2 232 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 PRSS27Q9BQR3 290 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 WNT5BQ9H1J7 359 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 MMP26Q9NRE1 261 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 LINC00862A6NCI5 91 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 C17orf100A8MU93 164 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 IL4P05112 153 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 PGA5P0DJD9 388 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 HOGA1Q86XE5 327 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 SCARF2Q96GP6 870 aaPredicted RBP8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 CEP290O15078 2479 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 IGHV2OR16-5A0A0B4J2B6 119 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 HOXA6P31267 233 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 EWSR1Q01844 656 aaKnown RBP eCLIP8.49□□□□□ -1.051e-9■■■■■ 35.7
CLTCL1-202ENST00000427926 TMEM183BQ1AE95 376 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 SNAI3Q3KNW1 292 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 GEMIN7Q9H840 131 aaKnown RBP8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 CTXND1A0A1B0GTU2 59 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 ZNF708P17019 499 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 SUCLG1P53597 346 aaKnown RBP8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 SAMD13Q5VXD3 122 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 ARPC1AQ92747 370 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 ANAPC16Q96DE5 110 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 ZNF638Q14966 1978 aaKnown RBP8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 RBBP6Q7Z6E9 1792 aaKnown RBP8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 IGHV3-66A0A0C4DH42 116 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 SCTP09683 121 aa8.49□□□□□ -1.05
CLTCL1-202ENST00000427926 HSPE1P61604 102 aaKnown RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms