RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 PPIHO43447 177 aaKnown RBP21.68■■□□□ 1.06
LDB1-202ENST00000425280 SSX9Q7RTT3 188 aa21.68■■□□□ 1.06
LDB1-202ENST00000425280 STX12Q86Y82 276 aa21.68■■□□□ 1.06
LDB1-202ENST00000425280 C11orf42Q8N5U0 333 aa21.68■■□□□ 1.06
LDB1-202ENST00000425280 RAB1CQ92928 201 aa21.68■■□□□ 1.06
LDB1-202ENST00000425280 MED6O75586 246 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 CT45A6P0DMU7 189 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 CT45A5P0DMU8 189 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 CT45A7P0DMV0 189 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 NQO2P16083 231 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 SULT1A1P50225 295 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 ZNF833PQ6ZTB9 187 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 VKORC1L1Q8N0U8 176 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 TIMD4Q96H15 378 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 A6NNC1 897 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 FAM90A9PA6NNJ1 464 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 C8orf31Q8N9H6 132 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 ZNF596Q8TC21 504 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 MIOXQ9UGB7 285 aa21.67■■□□□ 1.06
LDB1-202ENST00000425280 CRYZL1O95825 349 aa21.66■■□□□ 1.06
LDB1-202ENST00000425280 IGHV1-8P0DP01 117 aa21.66■■□□□ 1.06
LDB1-202ENST00000425280 SULT1A2P50226 295 aa21.66■■□□□ 1.06
LDB1-202ENST00000425280 ERVK-16P61578 105 aa21.66■■□□□ 1.06
LDB1-202ENST00000425280 ZNF266Q14584 549 aa21.66■■□□□ 1.06
LDB1-202ENST00000425280 OR8B3Q8NGG8 313 aa21.66■■□□□ 1.06
LDB1-202ENST00000425280 OR8B2Q96RD0 313 aa21.66■■□□□ 1.06
LDB1-202ENST00000425280 DOCK11Q5JSL3 2073 aa21.66■■□□□ 1.06
LDB1-202ENST00000425280 DCHS2Q6V1P9 2916 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 A0A087X0M5 115 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 A0A1B0GX30 115 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 J3QR06 171 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 GPR37O15354 613 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 RBMXL2O75526 392 aaKnown RBP21.65■■□□□ 1.06
LDB1-202ENST00000425280 CDKN1AP38936 164 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 LINC00311Q8N616 119 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 HSD17B11Q8NBQ5 300 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 NEIL1Q96FI4 390 aaPredicted RBP21.65■■□□□ 1.06
LDB1-202ENST00000425280 ZNF705EA8MWA4 302 aaPredicted RBP21.65■■□□□ 1.06
LDB1-202ENST00000425280 I3L521 148 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 PRB1P04280 392 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 SEC11BP0C7V7 166 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 SPP1P10451 314 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 TOR2AQ5JU69 321 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 OR1S2Q8NGQ3 325 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 BBC3Q96PG8 261 aaPredicted RBP21.65■■□□□ 1.06
LDB1-202ENST00000425280 QTRT1Q9BXR0 403 aaKnown RBP21.65■■□□□ 1.06
LDB1-202ENST00000425280 CHODLQ9H9P2 273 aa21.65■■□□□ 1.06
LDB1-202ENST00000425280 OR2B8PP59922 312 aa21.64■■□□□ 1.05
LDB1-202ENST00000425280 AARDQ4LEZ3 155 aa21.64■■□□□ 1.05
LDB1-202ENST00000425280 WDR25Q64LD2 544 aaPredicted RBP21.64■■□□□ 1.05
LDB1-202ENST00000425280 HSD17B13Q7Z5P4 300 aaPredicted RBP21.64■■□□□ 1.05
LDB1-202ENST00000425280 SH3BGRL3Q9H299 93 aa21.64■■□□□ 1.05
LDB1-202ENST00000425280 METTL15P1P0C7V9 234 aa21.64■■□□□ 1.05
LDB1-202ENST00000425280 ARHGDIBP52566 201 aa21.64■■□□□ 1.05
LDB1-202ENST00000425280 SPANXN5Q5MJ07 72 aa21.64■■□□□ 1.05
LDB1-202ENST00000425280 RBMXL1Q96E39 390 aaKnown RBP21.64■■□□□ 1.05
LDB1-202ENST00000425280 ATP5SQ99766 215 aa21.64■■□□□ 1.05
LDB1-202ENST00000425280 TMEM140Q9NV12 185 aa21.64■■□□□ 1.05
LDB1-202ENST00000425280 SESN1Q9Y6P5 492 aa21.64■■□□□ 1.05
LDB1-202ENST00000425280 MALRD1Q5VYJ5 2156 aa21.63■■□□□ 1.05
LDB1-202ENST00000425280 FGF2P09038 288 aa21.63■■□□□ 1.05
LDB1-202ENST00000425280 HAPLN4Q86UW8 402 aa21.63■■□□□ 1.05
LDB1-202ENST00000425280 OR10X1Q8NGY0 326 aa21.63■■□□□ 1.05
LDB1-202ENST00000425280 ZDHHC16Q969W1 377 aa21.63■■□□□ 1.05
LDB1-202ENST00000425280 ARL16Q0P5N6 197 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 C8orf46Q8TAG6 207 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 DTD1Q8TEA8 209 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 SAT2Q96F10 170 aaPredicted RBP21.62■■□□□ 1.05
LDB1-202ENST00000425280 MRPL20Q9BYC9 149 aaKnown RBP21.62■■□□□ 1.05
LDB1-202ENST00000425280 TRAV3A0A0B4J244 114 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 RELBQ01201 579 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 ABHD12Q8N2K0 398 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 EIF4E3Q8N5X7 224 aaKnown RBP21.62■■□□□ 1.05
LDB1-202ENST00000425280 OR4A16Q8NH70 328 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 OR9G1Q8NH87 305 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 TMEM133Q9H2Q1 129 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 SLC35D1Q9NTN3 355 aa21.62■■□□□ 1.05
LDB1-202ENST00000425280 SPINK9Q5DT21 86 aa21.61■■□□□ 1.05
LDB1-202ENST00000425280 TMEM14EPQ6UXP3 125 aa21.61■■□□□ 1.05
LDB1-202ENST00000425280 RHOVQ96L33 236 aa21.61■■□□□ 1.05
LDB1-202ENST00000425280 PPIAL4CA0A0B4J2A2 164 aa21.6■■□□□ 1.05
LDB1-202ENST00000425280 NDUFS7O75251 213 aa21.6■■□□□ 1.05
LDB1-202ENST00000425280 PPIAL4GP0DN37 164 aa21.6■■□□□ 1.05
LDB1-202ENST00000425280 RTL8BQ17RB0 113 aa21.6■■□□□ 1.05
LDB1-202ENST00000425280 STPG2Q8N412 459 aa21.6■■□□□ 1.05
LDB1-202ENST00000425280 OR4C12Q96R67 309 aa21.6■■□□□ 1.05
LDB1-202ENST00000425280 CEBPZOSA8MTT3 80 aa21.6■■□□□ 1.05
LDB1-202ENST00000425280 A8MXK9 166 aa21.6■■□□□ 1.05
LDB1-202ENST00000425280 MARVELD3Q96A59 401 aa21.6■■□□□ 1.05
LDB1-202ENST00000425280 DFFBO76075 338 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 F12P00748 615 aaPredicted RBP21.59■■□□□ 1.05
LDB1-202ENST00000425280 IGKV1-16P04430 117 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 ATP6V0CP27449 155 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 POU2AF1Q16633 256 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 DHRS7BQ6IAN0 325 aaPredicted RBP21.59■■□□□ 1.05
LDB1-202ENST00000425280 OR4A47Q6IF82 309 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 FAM71F2Q6NXP2 309 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 ST6GALNAC6Q969X2 333 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 TMEM186Q96B77 213 aa21.59■■□□□ 1.05
LDB1-202ENST00000425280 CIB3Q96Q77 187 aaPredicted RBP21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms