RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PINX1Q96BK5 328 aaKnown RBP9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 RNF2Q99496 336 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 MMP17Q9ULZ9 603 aa9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 MRPS16Q9Y3D3 137 aaKnown RBP9.52□□□□□ -0.88
SEC61A1-202ENST00000424880 H0Y980 276 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 MLNRO43193 412 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 ZG16O60844 167 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 VENTXO95231 258 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 IGHV4-34P06331 123 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 CAPZBP47756 277 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 HOXA4Q00056 320 aaPredicted RBP9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 CNN3Q15417 329 aaKnown RBP9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 TMEM211Q6ICI0 200 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 NABP1Q96AH0 204 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 OXGR1Q96P68 337 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 LRRC61Q9BV99 259 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 ULBP2Q9BZM5 246 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 CST9LQ9H4G1 147 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 GP6Q9HCN6 339 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 ZNF318Q5VUA4 2279 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 CA1P00915 261 aaPredicted RBP9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 FBLP22087 321 aaKnown RBP9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 TNFRSF14Q92956 283 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 SPSB1Q96BD6 273 aa9.52□□□□□ -0.89
SEC61A1-202ENST00000424880 SPENQ96T58 3664 aaKnown RBP9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 A0A1W2PS18 150 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 K7EN84 100 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 SAP30O75446 220 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 CD99P14209 185 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 ZNF32P17041 273 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 NTF4P34130 210 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 FUT6P51993 359 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 MPV17L2Q567V2 206 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 OR2M7Q8NG81 312 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 OR10G8Q8NGN5 311 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 MAFAQ8NHW3 353 aaPredicted RBP9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 GMPPAQ96IJ6 420 aaPredicted RBP9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 MRPL27Q9P0M9 148 aaKnown RBP9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 ZNF891A8MT65 544 aaPredicted RBP9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 RAB29O14966 203 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 DHHO43323 396 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 SLC25A6P12236 298 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 TNFSF4P23510 183 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 SRIP30626 198 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 BMI1P35226 326 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 Q5PR19 223 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 PCSK4Q6UW60 755 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 ZNF808Q8N4W9 903 aaPredicted RBP9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 BCL2L2Q92843 193 aaPredicted RBP9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 SMIM12Q96EX1 92 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 BET1LQ9NYM9 111 aa9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 TIMM8BQ9Y5J9 83 aaPredicted RBP9.51□□□□□ -0.89
SEC61A1-202ENST00000424880 NPIPA3F8WFD2 350 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 H0Y8G0 127 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 TIMP3P35625 211 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 CDC34P49427 236 aaPredicted RBP9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 FOXL1Q12952 345 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 PMCHL1Q16048 86 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 OR4A47Q6IF82 309 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 FGFRL1Q8N441 504 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 PLPPR2Q96GM1 343 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 NPCDR1Q9BY65 106 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 RNASE7Q9H1E1 156 aaKnown RBP9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 CDC42EP3Q9UKI2 254 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 TLX3O43711 291 aaPredicted RBP9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 SYNGR1O43759 233 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 GLB1P16278 677 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 HTD2P86397 168 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 ZNF585BQ52M93 769 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 C1orf185Q5T7R7 199 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 KIAA0895LQ68EN5 471 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 AMMECR1LQ6DCA0 310 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 DOLPP1Q86YN1 238 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 STPG3Q8N7X2 389 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 ZNF441Q8N8Z8 693 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 CLEC7AQ9BXN2 247 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 SNAI2O43623 268 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 PIAS2O75928 621 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 COX5AP20674 150 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 OR1D5P58170 312 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 HIST3H3Q16695 136 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 LHFPL2Q6ZUX7 228 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 NEUROG1Q92886 237 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 WASHC3Q9Y3C0 194 aa9.5□□□□□ -0.89
SEC61A1-202ENST00000424880 RRHO14718 337 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 ZIC3O60481 467 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 ARL14EPLP0DKL9 152 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 ARF6P62330 175 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 ZNF841Q6ZN19 808 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 KIR3DL3Q8N743 410 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 NHLRC2Q8NBF2 726 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 TSTD1Q8NFU3 115 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 CLDN23Q96B33 292 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 NAA38Q9BRA0 125 aaKnown RBP9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 QTRT1Q9BXR0 403 aaKnown RBP9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 MTCH1Q9NZJ7 389 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 SPTY2D1-AS1A0A0U1RR47 76 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 A0A1W2PPV4 95 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 IGLV2-14P01704 120 aa9.49□□□□□ -0.89
SEC61A1-202ENST00000424880 TCTAP57738 103 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms